The 2.0 version of rSNPBase

Variant report

Variant rs55679069
Chromosome Location chr4:143049176-143049177
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:56 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr4:142990000-143051200 Weak transcription Sigmoid Colon Sigmoid Colon
2 chr4:143004600-143051600 Weak transcription Pancreas Pancrea
3 chr4:143010400-143057000 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
4 chr4:143014600-143049600 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
5 chr4:143015800-143049600 Weak transcription Fetal Muscle Leg muscle
6 chr4:143018800-143109600 Weak transcription Fetal Muscle Trunk muscle
7 chr4:143022600-143049600 Weak transcription NHDF-Ad bronchial
8 chr4:143025400-143066800 Weak transcription Rectal Mucosa Donor 29 rectum
9 chr4:143030000-143049400 Weak transcription Left Ventricle heart
10 chr4:143030000-143057000 Weak transcription Primary mononuclear cells fromperipheralblood Blood
11 chr4:143031000-143064800 Weak transcription Breast Myoepithelial Primary Cells Breast
12 chr4:143032000-143049600 Weak transcription Primary hematopoietic stem cells blood
13 chr4:143034000-143061600 Weak transcription Muscle Satellite Cultured Cells --
14 chr4:143039200-143059000 Weak transcription Skeletal Muscle Female skeletal muscle
15 chr4:143040600-143049800 Weak transcription Duodenum Smooth Muscle Duodenum
16 chr4:143042200-143051400 Weak transcription Aorta Aorta
17 chr4:143042200-143060200 Weak transcription Primary Natural Killer cells fromperipheralblood blood
18 chr4:143042400-143049400 Weak transcription Skeletal Muscle Male skeletal muscle
19 chr4:143042600-143049800 Weak transcription Brain Hippocampus Middle brain
20 chr4:143042600-143051600 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
21 chr4:143043400-143089000 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
22 chr4:143043600-143056600 Weak transcription Primary hematopoietic stem cells short term culture blood
23 chr4:143043800-143049600 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
24 chr4:143043800-143054000 Weak transcription Psoas Muscle Psoas
25 chr4:143044800-143049400 Weak transcription Fetal Heart heart
26 chr4:143045400-143050200 Weak transcription Primary T killer memory cells from peripheral blood blood
27 chr4:143045600-143050000 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
28 chr4:143045800-143057200 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
29 chr4:143046000-143049600 Weak transcription Primary T helper 17 cells PMA-I stimulated --
30 chr4:143046000-143049800 Weak transcription Primary T helper naive cells from peripheral blood blood
31 chr4:143046000-143049800 Weak transcription Primary T helper naive cells fromperipheralblood blood
32 chr4:143046000-143049800 Weak transcription Primary T helper cells PMA-I stimulated --
33 chr4:143046000-143050200 Weak transcription Primary T regulatory cells fromperipheralblood blood
34 chr4:143046000-143050600 Weak transcription HMEC breast
35 chr4:143046000-143051400 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
36 chr4:143046000-143051600 Weak transcription NHEK skin
37 chr4:143046400-143049600 Weak transcription Dnd41 blood
38 chr4:143046400-143051400 Weak transcription Primary T cells from cord blood blood
39 chr4:143046400-143052200 Weak transcription Primary T cells fromperipheralblood blood
40 chr4:143046400-143054600 Weak transcription HSMM muscle
41 chr4:143046800-143057200 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
42 chr4:143047000-143049600 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
43 chr4:143047000-143049800 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
44 chr4:143047200-143051200 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
45 chr4:143047600-143049800 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
46 chr4:143048000-143050200 Enhancers Rectal Smooth Muscle rectum
47 chr4:143048200-143049400 Weak transcription HUVEC blood vessel
48 chr4:143048200-143049800 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
49 chr4:143048400-143050000 Enhancers Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
50 chr4:143048800-143049400 Enhancers Colon Smooth Muscle Colon

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Last update: Aug 31, 2015