The 2.0 version of rSNPBase

Variant report

Variant rs28588595
Chromosome Location chr4:143042350-143042351
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:53 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr4:142990000-143051200 Weak transcription Sigmoid Colon Sigmoid Colon
2 chr4:143004600-143051600 Weak transcription Pancreas Pancrea
3 chr4:143010400-143043400 Weak transcription Psoas Muscle Psoas
4 chr4:143010400-143057000 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
5 chr4:143014600-143049600 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
6 chr4:143015800-143049600 Weak transcription Fetal Muscle Leg muscle
7 chr4:143017800-143044400 Weak transcription Fetal Heart heart
8 chr4:143018800-143109600 Weak transcription Fetal Muscle Trunk muscle
9 chr4:143022400-143045200 Weak transcription Stomach Smooth Muscle stomach
10 chr4:143022600-143049600 Weak transcription NHDF-Ad bronchial
11 chr4:143025400-143066800 Weak transcription Rectal Mucosa Donor 29 rectum
12 chr4:143030000-143049400 Weak transcription Left Ventricle heart
13 chr4:143030000-143057000 Weak transcription Primary mononuclear cells fromperipheralblood Blood
14 chr4:143031000-143064800 Weak transcription Breast Myoepithelial Primary Cells Breast
15 chr4:143031800-143048000 Weak transcription Rectal Smooth Muscle rectum
16 chr4:143032000-143043200 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
17 chr4:143032000-143049600 Weak transcription Primary hematopoietic stem cells blood
18 chr4:143034000-143048400 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
19 chr4:143034000-143061600 Weak transcription Muscle Satellite Cultured Cells --
20 chr4:143039200-143059000 Weak transcription Skeletal Muscle Female skeletal muscle
21 chr4:143040400-143042400 Strong transcription Foreskin Keratinocyte Primary Cells skin02 Skin
22 chr4:143040400-143046000 Strong transcription Primary T regulatory cells fromperipheralblood blood
23 chr4:143040400-143046400 Strong transcription Foreskin Keratinocyte Primary Cells skin03 Skin
24 chr4:143040400-143047200 Strong transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
25 chr4:143040600-143042400 Strong transcription Skeletal Muscle Male skeletal muscle
26 chr4:143040600-143046000 Strong transcription Primary T helper cells PMA-I stimulated --
27 chr4:143040600-143046800 Strong transcription Primary T cells effector/memory enriched fromperipheralblood blood
28 chr4:143040600-143049800 Weak transcription Duodenum Smooth Muscle Duodenum
29 chr4:143041000-143045800 Strong transcription Foreskin Melanocyte Primary Cells skin03 Skin
30 chr4:143041000-143047000 Strong transcription Primary T helper cells fromperipheralblood blood
31 chr4:143041200-143046000 Strong transcription Primary T helper 17 cells PMA-I stimulated --
32 chr4:143041200-143046400 Strong transcription Primary T cells fromperipheralblood blood
33 chr4:143041200-143046400 Strong transcription Dnd41 blood
34 chr4:143041200-143046400 Strong transcription HSMM muscle
35 chr4:143041400-143046000 Strong transcription HMEC breast
36 chr4:143041400-143046000 Strong transcription HSMMtube muscle
37 chr4:143041400-143047600 Strong transcription Primary T helper memory cells from peripheral blood 1 blood
38 chr4:143041600-143042600 Strong transcription Primary hematopoietic stem cells short term culture blood
39 chr4:143041600-143042600 Strong transcription Foreskin Melanocyte Primary Cells skin01 Skin
40 chr4:143041600-143043800 Strong transcription Foreskin Fibroblast Primary Cells skin01 Skin
41 chr4:143041600-143045600 Strong transcription Primary T helper memory cells from peripheral blood 2 blood
42 chr4:143041600-143046000 Strong transcription Primary T helper naive cells fromperipheralblood blood
43 chr4:143041600-143046400 Strong transcription Primary T cells from cord blood blood
44 chr4:143041800-143042800 Strong transcription Primary T killer naive cells fromperipheralblood blood
45 chr4:143041800-143045000 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
46 chr4:143041800-143046000 Strong transcription NHEK skin
47 chr4:143042000-143043200 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
48 chr4:143042000-143043400 Weak transcription Lung lung
49 chr4:143042000-143045400 Strong transcription Primary T killer memory cells from peripheral blood blood
50 chr4:143042200-143043000 Weak transcription Primary T helper naive cells from peripheral blood blood

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Last update: Aug 31, 2015