Variant report

rSNPs within LD-proxies of this variant (count:22)

rs_ID	r²[population]
rs10011147	0.87[ASN][1000 genomes]
rs10025191	0.89[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs10032035	0.81[ASN][1000 genomes]
rs11097638	1.00[CEU][hapmap];0.88[ASN][1000 genomes]
rs12108521	0.81[ASN][1000 genomes]
rs13135078	0.83[ASN][1000 genomes]
rs2120377	0.81[ASN][1000 genomes]
rs2165945	0.81[ASN][1000 genomes]
rs28705981	0.81[ASN][1000 genomes]
rs4632668	0.81[ASN][1000 genomes]
rs4699679	0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs4699684	0.81[ASN][1000 genomes]
rs5025596	0.81[ASN][1000 genomes]
rs6532770	0.81[ASN][1000 genomes]
rs6532771	0.81[ASN][1000 genomes]
rs6813043	0.81[ASN][1000 genomes]
rs7673626	0.93[AFR][1000 genomes];0.89[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7698057	0.89[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7698463	0.89[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs9684353	1.00[CEU][hapmap];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs9991845	0.85[ASN][1000 genomes]
rs9997942	0.81[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1009017	chr4:99669441-100406394	Active TSS Enhancers Flanking Active TSS Weak transcription Strong transcription ZNF genes & repeats Transcr. at gene 5' and 3' Genic enhancers Bivalent/Poised TSS Bivalent Enhancer Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	57 gene(s)	inside rSNPs	diseases
2	nsv879654	chr4:99748988-99877402	Weak transcription Enhancers Strong transcription Active TSS Flanking Active TSS Genic enhancers ZNF genes & repeats Transcr. at gene 5' and 3' Bivalent/Poised TSS Bivalent Enhancer Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	31 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:8 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr4:99756600-99760600	Weak transcription	Right Atrium	heart
2	chr4:99757600-99760400	Weak transcription	HMEC	breast
3	chr4:99759200-99760000	Weak transcription	Fetal Heart	heart
4	chr4:99759400-99760000	Enhancers	Fetal Lung	lung
5	chr4:99759400-99760800	Enhancers	Brain Anterior Caudate	brain
6	chr4:99759600-99760200	Enhancers	Adipose Nuclei	Adipose
7	chr4:99759600-99760200	Enhancers	Brain Inferior Temporal Lobe	brain
8	chr4:99759600-99760400	Enhancers	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived

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