Variant report

Variant	rs10020585
Chromosome Location	chr4:160345920-160345921
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 32 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:32)

rs_ID	r²[population]
rs10011024	0.88[AMR][1000 genomes];0.88[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs10030535	0.88[AFR][1000 genomes];0.87[ASN][1000 genomes]
rs11100224	0.91[AFR][1000 genomes];0.84[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs11100225	0.84[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs11100226	0.87[AFR][1000 genomes];0.81[ASN][1000 genomes]
rs11100227	0.84[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs11100228	0.88[ASN][1000 genomes]
rs11733568	0.90[AFR][1000 genomes];0.87[ASN][1000 genomes]
rs12645666	0.85[ASN][1000 genomes]
rs1609412	0.85[ASN][1000 genomes]
rs17038157	0.85[ASN][1000 genomes]
rs2244934	0.85[ASN][1000 genomes]
rs2348164	0.87[ASN][1000 genomes]
rs2463987	0.85[ASN][1000 genomes]
rs2699017	0.85[ASN][1000 genomes]
rs4691563	0.84[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs4691564	0.81[EUR][1000 genomes]
rs6536418	0.87[ASN][1000 genomes]
rs6812503	0.84[AFR][1000 genomes];0.87[ASN][1000 genomes]
rs6812880	0.88[AFR][1000 genomes];0.87[ASN][1000 genomes]
rs6822019	0.87[ASN][1000 genomes]
rs6835707	0.84[AFR][1000 genomes];0.87[ASN][1000 genomes]
rs6835727	0.87[ASN][1000 genomes]
rs6836178	0.88[AFR][1000 genomes];0.87[ASN][1000 genomes]
rs6836370	0.88[AFR][1000 genomes];0.87[ASN][1000 genomes]
rs6836429	0.88[AFR][1000 genomes];0.84[ASN][1000 genomes]
rs6844998	0.85[ASN][1000 genomes]
rs7439919	0.87[ASN][1000 genomes]
rs7439988	0.84[AFR][1000 genomes];0.83[ASN][1000 genomes]
rs9790387	0.88[AFR][1000 genomes];0.84[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs9790650	0.84[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs9990950	0.84[EUR][1000 genomes];0.82[ASN][1000 genomes]

No data

Chromatin state (count:4 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr4:160339200-160348000	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
2	chr4:160341800-160346800	Weak transcription	K562	blood
3	chr4:160342000-160346400	Weak transcription	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
4	chr4:160345600-160348400	Weak transcription	HepG2	liver

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