The 2.0 version of rSNPBase

Variant report

Variant rs10035222
Chromosome Location chr5:142738463-142738464
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:83 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr5:142693800-142747400 Weak transcription Fetal Muscle Trunk muscle
2 chr5:142725000-142764200 Weak transcription Lung lung
3 chr5:142727600-142740200 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
4 chr5:142733800-142742000 Enhancers Primary T helper memory cells from peripheral blood 1 blood
5 chr5:142734000-142738800 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
6 chr5:142734000-142743000 Enhancers Primary T helper naive cells from peripheral blood blood
7 chr5:142734000-142756400 Weak transcription Primary mononuclear cells fromperipheralblood Blood
8 chr5:142734200-142739400 Enhancers Primary T helper naive cells fromperipheralblood blood
9 chr5:142734200-142740400 Weak transcription Stomach Smooth Muscle stomach
10 chr5:142734200-142742200 Weak transcription Sigmoid Colon Sigmoid Colon
11 chr5:142734200-142743600 Enhancers Primary T helper cells PMA-I stimulated --
12 chr5:142734200-142743600 Enhancers Primary T helper cells fromperipheralblood blood
13 chr5:142734200-142754200 Enhancers Primary T helper memory cells from peripheral blood 2 blood
14 chr5:142734400-142739000 Weak transcription Thymus Thymus
15 chr5:142734400-142739200 Weak transcription Fetal Thymus thymus
16 chr5:142734400-142740200 Weak transcription Primary B cells from peripheral blood blood
17 chr5:142734400-142741000 Weak transcription Psoas Muscle Psoas
18 chr5:142734800-142740200 Weak transcription Right Ventricle heart
19 chr5:142735400-142740000 Weak transcription HUES6 Cell Line embryonic stem cell
20 chr5:142735600-142739200 Weak transcription Primary T cells fromperipheralblood blood
21 chr5:142735600-142739200 Weak transcription Primary Natural Killer cells fromperipheralblood blood
22 chr5:142735600-142739800 Weak transcription Pancreatic Islets Pancreatic Islet
23 chr5:142735600-142740000 Weak transcription Duodenum Smooth Muscle Duodenum
24 chr5:142735600-142740200 Weak transcription Rectal Smooth Muscle rectum
25 chr5:142735600-142742400 Weak transcription Left Ventricle heart
26 chr5:142735600-142743000 Weak transcription Fetal Adrenal Gland Adrenal Gland
27 chr5:142735600-142743600 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
28 chr5:142735600-142743600 Weak transcription HSMM muscle
29 chr5:142735600-142743800 Weak transcription Primary hematopoietic stem cells blood
30 chr5:142735600-142756000 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
31 chr5:142735800-142739200 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
32 chr5:142735800-142739600 Weak transcription Primary B cells from cord blood blood
33 chr5:142735800-142748200 Weak transcription Muscle Satellite Cultured Cells --
34 chr5:142735800-142751200 Weak transcription HMEC breast
35 chr5:142735800-142751800 Weak transcription NHEK skin
36 chr5:142736000-142739200 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
37 chr5:142736000-142740400 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
38 chr5:142736200-142738600 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
39 chr5:142736200-142740600 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
40 chr5:142736200-142741600 Weak transcription Fetal Muscle Leg muscle
41 chr5:142736200-142741800 Weak transcription Right Atrium heart
42 chr5:142736200-142742200 Weak transcription Ovary ovary
43 chr5:142736200-142746200 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
44 chr5:142736200-142748200 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
45 chr5:142736200-142755800 Weak transcription Small Intestine intestine
46 chr5:142736200-142756000 Weak transcription Placenta Amnion Placenta Amnion
47 chr5:142736400-142738800 Weak transcription Primary T regulatory cells fromperipheralblood blood
48 chr5:142736600-142740000 Weak transcription Fetal Heart heart
49 chr5:142736800-142738800 Weak transcription Duodenum Mucosa Duodenum
50 chr5:142736800-142738800 Weak transcription NHDF-Ad bronchial

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Last update: Aug 31, 2015