Variant report

Variant rs10055444
Chromosome Location chr5:142765433-142765434
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:82 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr5:142741600-142771600 Weak transcription Stomach Smooth Muscle stomach
2 chr5:142756600-142766400 Weak transcription Pancreas Pancrea
3 chr5:142757600-142768400 Weak transcription Colon Smooth Muscle Colon
4 chr5:142761200-142767200 ZNF genes & repeats Primary hematopoietic stem cells G-CSF-mobilized Female --
5 chr5:142761200-142778600 Weak transcription Rectal Mucosa Donor 31 rectum
6 chr5:142761400-142766600 ZNF genes & repeats Fetal Muscle Leg muscle
7 chr5:142761400-142769600 ZNF genes & repeats GM12878-XiMat blood
8 chr5:142761800-142766800 ZNF genes & repeats Primary hematopoietic stem cells G-CSF-mobilized Male --
9 chr5:142762000-142766600 ZNF genes & repeats Primary B cells from cord blood blood
10 chr5:142762200-142766000 Strong transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
11 chr5:142762200-142766600 ZNF genes & repeats Primary hematopoietic stem cells blood
12 chr5:142762200-142767400 ZNF genes & repeats hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
13 chr5:142762400-142766600 ZNF genes & repeats Primary hematopoietic stem cells short term culture blood
14 chr5:142762400-142767800 ZNF genes & repeats A549 lung
15 chr5:142763400-142766400 Strong transcription Osteobl bone
16 chr5:142763600-142765600 ZNF genes & repeats Fetal Thymus thymus
17 chr5:142763600-142765800 ZNF genes & repeats Breast Myoepithelial Primary Cells Breast
18 chr5:142763600-142765800 ZNF genes & repeats Primary monocytes fromperipheralblood blood
19 chr5:142763600-142765800 ZNF genes & repeats HSMM muscle
20 chr5:142763600-142766200 ZNF genes & repeats Fetal Intestine Small intestine
21 chr5:142763600-142766400 ZNF genes & repeats Foreskin Keratinocyte Primary Cells skin02 Skin
22 chr5:142763600-142766800 ZNF genes & repeats Primary B cells from peripheral blood blood
23 chr5:142763800-142765800 ZNF genes & repeats Muscle Satellite Cultured Cells --
24 chr5:142763800-142766000 ZNF genes & repeats HMEC breast
25 chr5:142764000-142765800 ZNF genes & repeats Brain Anterior Caudate brain
26 chr5:142764000-142766600 ZNF genes & repeats Monocytes-CD14+_RO01746 blood
27 chr5:142764200-142765600 ZNF genes & repeats Brain Substantia Nigra brain
28 chr5:142764200-142765800 ZNF genes & repeats IMR90 fetal lung fibroblasts Cell Line lung
29 chr5:142764200-142765800 ZNF genes & repeats Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
30 chr5:142764200-142765800 ZNF genes & repeats Primary Natural Killer cells fromperipheralblood blood
31 chr5:142764200-142765800 ZNF genes & repeats Foreskin Fibroblast Primary Cells skin01 Skin
32 chr5:142764200-142765800 ZNF genes & repeats Foreskin Keratinocyte Primary Cells skin03 Skin
33 chr5:142764200-142765800 ZNF genes & repeats Foreskin Melanocyte Primary Cells skin03 Skin
34 chr5:142764200-142765800 ZNF genes & repeats Primary mononuclear cells fromperipheralblood Blood
35 chr5:142764200-142765800 ZNF genes & repeats Fetal Lung lung
36 chr5:142764200-142765800 ZNF genes & repeats Placenta Placenta
37 chr5:142764200-142765800 ZNF genes & repeats Thymus Thymus
38 chr5:142764200-142766000 ZNF genes & repeats ES-UCSF4 Cell Line embryonic stem cell
39 chr5:142764200-142766000 ZNF genes & repeats Primary T helper cells fromperipheralblood blood
40 chr5:142764200-142766200 ZNF genes & repeats Hela-S3 cervix
41 chr5:142764200-142766400 Strong transcription Foreskin Fibroblast Primary Cells skin02 Skin
42 chr5:142764400-142765600 ZNF genes & repeats Primary T regulatory cells fromperipheralblood blood
43 chr5:142764400-142765600 ZNF genes & repeats Primary T cells effector/memory enriched fromperipheralblood blood
44 chr5:142764400-142765600 ZNF genes & repeats Adipose Nuclei Adipose
45 chr5:142764400-142765800 ZNF genes & repeats Brain Hippocampus Middle brain
46 chr5:142764400-142765800 ZNF genes & repeats Fetal Muscle Trunk muscle
47 chr5:142764400-142765800 Strong transcription Left Ventricle heart
48 chr5:142764400-142768200 ZNF genes & repeats Dnd41 blood
49 chr5:142764400-142778200 Weak transcription Ovary ovary
50 chr5:142764600-142765600 ZNF genes & repeats Pancreatic Islets Pancreatic Islet

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