Variant report

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr5:43337657..43339686-chr5:43354363..43357334,2	K562	blood:

rSNPs within LD-proxies of this variant (count:26)

rs_ID	r²[population]
rs10043148	1.00[CEU][hapmap]
rs10054415	1.00[CEU][hapmap]
rs10056437	1.00[CEU][hapmap]
rs10060213	0.92[EUR][1000 genomes]
rs10062598	1.00[CEU][hapmap]
rs10067763	1.00[CEU][hapmap]
rs10069507	0.89[ASW][hapmap];1.00[CEU][hapmap];1.00[GIH][hapmap];1.00[LWK][hapmap];1.00[MEX][hapmap];1.00[MKK][hapmap];1.00[TSI][hapmap];0.96[YRI][hapmap];0.96[AFR][1000 genomes];1.00[EUR][1000 genomes]
rs10473306	1.00[CEU][hapmap]
rs10473308	1.00[CEU][hapmap]
rs16874093	1.00[CEU][hapmap]
rs16874094	1.00[CEU][hapmap];1.00[GIH][hapmap];1.00[MEX][hapmap]
rs28738834	0.95[AFR][1000 genomes];1.00[EUR][1000 genomes]
rs6865440	1.00[GIH][hapmap];1.00[MEX][hapmap]
rs6868860	0.99[AFR][1000 genomes];0.83[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs6884349	0.81[ASW][hapmap];1.00[CEU][hapmap];1.00[GIH][hapmap];1.00[MEX][hapmap]
rs6887169	1.00[MEX][hapmap]
rs6894240	1.00[CEU][hapmap]
rs6895237	1.00[CEU][hapmap];1.00[GIH][hapmap];1.00[MEX][hapmap]
rs7710717	1.00[CEU][hapmap];1.00[GIH][hapmap];1.00[MEX][hapmap]
rs7729140	1.00[CEU][hapmap]
rs7729145	1.00[CEU][hapmap]
rs7733732	1.00[CEU][hapmap]
rs9292869	1.00[CEU][hapmap];1.00[GIH][hapmap];1.00[MEX][hapmap]
rs9292870	1.00[CEU][hapmap];1.00[GIH][hapmap];1.00[MEX][hapmap]
rs9292872	1.00[CEU][hapmap];1.00[GIH][hapmap];1.00[MEX][hapmap]
rs9292875	1.00[CEU][hapmap]

Variant overlapped rSNPs/rCNVs (count:3 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1023741	chr5:42768215-43348145	Flanking Active TSS Weak transcription Bivalent/Poised TSS Enhancers Strong transcription Genic enhancers Active TSS Flanking Bivalent TSS/Enh Bivalent Enhancer Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	309 gene(s)	inside rSNPs	diseases
2	nsv537737	chr5:42768215-43348145	Genic enhancers Enhancers Active TSS Weak transcription Bivalent/Poised TSS Bivalent Enhancer Flanking Active TSS Strong transcription Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	309 gene(s)	inside rSNPs	diseases
3	nsv508352	chr5:43237830-43391062	Enhancers Strong transcription Genic enhancers Weak transcription Active TSS Flanking Active TSS Bivalent Enhancer Transcr. at gene 5' and 3' ZNF genes & repeats Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	31 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:3 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr5:43338200-43338400	Enhancers	Primary hematopoietic stem cells short term culture	blood
2	chr5:43338200-43338800	Enhancers	Primary monocytes fromperipheralblood	blood
3	chr5:43338200-43339200	Enhancers	Monocytes-CD14+_RO01746	blood

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