Variant report

Variant rs10043507
Chromosome Location chr5:154070836-154070837
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:63 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr5:154063800-154071200 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
2 chr5:154064400-154071000 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
3 chr5:154064400-154071000 Weak transcription Psoas Muscle Psoas
4 chr5:154066400-154071800 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
5 chr5:154066600-154071000 Weak transcription Colonic Mucosa Colon
6 chr5:154066600-154071000 Weak transcription NHLF lung
7 chr5:154069600-154071000 Enhancers H1 Cell Line embryonic stem cell
8 chr5:154069600-154071200 Enhancers iPS DF 6.9 Cell Line embryonic stem cell
9 chr5:154070000-154071000 Weak transcription iPS-18 Cell Line embryonic stem cell
10 chr5:154070000-154071600 Active TSS iPS-15b Cell Line embryonic stem cell
11 chr5:154070200-154071000 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
12 chr5:154070600-154071000 Enhancers H1 Derived Mesenchymal Stem Cells ES cell derived
13 chr5:154070600-154071200 Weak transcription Fetal Heart heart
14 chr5:154070800-154071000 Enhancers H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
15 chr5:154070800-154071000 Active TSS Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
16 chr5:154070800-154071000 Flanking Active TSS Breast Myoepithelial Primary Cells Breast
17 chr5:154070800-154071000 Active TSS Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
18 chr5:154070800-154071000 Enhancers Muscle Satellite Cultured Cells --
19 chr5:154070800-154071000 Flanking Active TSS Foreskin Keratinocyte Primary Cells skin02 Skin
20 chr5:154070800-154071000 Active TSS Foreskin Keratinocyte Primary Cells skin03 Skin
21 chr5:154070800-154071000 Active TSS Brain Anterior Caudate brain
22 chr5:154070800-154071000 Enhancers Esophagus oesophagus
23 chr5:154070800-154071000 Active TSS Fetal Intestine Large intestine
24 chr5:154070800-154071000 Flanking Active TSS Fetal Intestine Small intestine
25 chr5:154070800-154071000 Bivalent Enhancer Fetal Muscle Trunk muscle
26 chr5:154070800-154071000 Bivalent Enhancer Fetal Muscle Leg muscle
27 chr5:154070800-154071000 Active TSS Gastric stomach
28 chr5:154070800-154071000 Active TSS Placenta Amnion Placenta Amnion
29 chr5:154070800-154071000 Flanking Active TSS Right Ventricle heart
30 chr5:154070800-154071000 Active TSS Skeletal Muscle Male skeletal muscle
31 chr5:154070800-154071000 Active TSS Stomach Smooth Muscle stomach
32 chr5:154070800-154071000 Active TSS HUVEC blood vessel
33 chr5:154070800-154071000 Bivalent/Poised TSS Monocytes-CD14+_RO01746 blood
34 chr5:154070800-154071000 Active TSS NHEK skin
35 chr5:154070800-154071000 Active TSS Osteobl bone
36 chr5:154070800-154071200 Active TSS Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
37 chr5:154070800-154071200 Active TSS Brain Inferior Temporal Lobe brain
38 chr5:154070800-154071200 Flanking Active TSS Left Ventricle heart
39 chr5:154070800-154071400 Bivalent/Poised TSS Primary hematopoietic stem cells G-CSF-mobilized Male --
40 chr5:154070800-154071400 Flanking Active TSS Foreskin Fibroblast Primary Cells skin01 Skin
41 chr5:154070800-154071400 Active TSS Foreskin Melanocyte Primary Cells skin01 Skin
42 chr5:154070800-154071400 Flanking Active TSS Foreskin Melanocyte Primary Cells skin03 Skin
43 chr5:154070800-154071400 Flanking Active TSS Adipose Nuclei Adipose
44 chr5:154070800-154071400 Active TSS Brain Dorsolateral Prefrontal Cortex brain
45 chr5:154070800-154071400 Active TSS Colon Smooth Muscle Colon
46 chr5:154070800-154071400 Active TSS Duodenum Mucosa Duodenum
47 chr5:154070800-154071400 Active TSS Duodenum Smooth Muscle Duodenum
48 chr5:154070800-154071400 Flanking Bivalent TSS/Enh Fetal Adrenal Gland Adrenal Gland
49 chr5:154070800-154071400 Bivalent Enhancer Fetal Brain Male brain
50 chr5:154070800-154071400 Active TSS Pancreatic Islets Pancreatic Islet

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