The 2.0 version of rSNPBase

Variant report

Variant rs10049233
Chromosome Location chr3:135785469-135785470
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:62 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr3:135746200-135790000 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
2 chr3:135755200-135801400 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
3 chr3:135761000-135802400 Weak transcription iPS-18 Cell Line embryonic stem cell
4 chr3:135763000-135785600 Weak transcription Brain Anterior Caudate brain
5 chr3:135764400-135790400 Weak transcription Brain Cingulate Gyrus brain
6 chr3:135764800-135790400 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
7 chr3:135765000-135786000 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
8 chr3:135765000-135801800 Weak transcription Esophagus oesophagus
9 chr3:135768800-135800800 Weak transcription HUES64 Cell Line embryonic stem cell
10 chr3:135769800-135789400 Weak transcription Colon Smooth Muscle Colon
11 chr3:135769800-135789800 Weak transcription Psoas Muscle Psoas
12 chr3:135769800-135790000 Weak transcription Aorta Aorta
13 chr3:135769800-135790400 Weak transcription Primary hematopoietic stem cells blood
14 chr3:135770000-135787200 Weak transcription Osteobl bone
15 chr3:135770000-135789800 Weak transcription Duodenum Smooth Muscle Duodenum
16 chr3:135770000-135800800 Weak transcription Fetal Intestine Large intestine
17 chr3:135770400-135789800 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
18 chr3:135771200-135802000 Weak transcription Brain Germinal Matrix brain
19 chr3:135771200-135809600 Weak transcription Gastric stomach
20 chr3:135771400-135789000 Weak transcription HSMMtube muscle
21 chr3:135772600-135789600 Weak transcription Rectal Mucosa Donor 29 rectum
22 chr3:135772600-135789800 Weak transcription Fetal Adrenal Gland Adrenal Gland
23 chr3:135772600-135789800 Weak transcription Ovary ovary
24 chr3:135773000-135787400 Weak transcription Muscle Satellite Cultured Cells --
25 chr3:135774400-135802000 Weak transcription Sigmoid Colon Sigmoid Colon
26 chr3:135774600-135788800 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
27 chr3:135774800-135789000 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
28 chr3:135774800-135789800 Weak transcription Left Ventricle heart
29 chr3:135775000-135787600 Weak transcription Rectal Smooth Muscle rectum
30 chr3:135775000-135788800 Weak transcription NHEK skin
31 chr3:135775000-135789200 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
32 chr3:135775000-135789200 Weak transcription Fetal Muscle Trunk muscle
33 chr3:135775000-135789400 Weak transcription Stomach Smooth Muscle stomach
34 chr3:135775000-135789800 Weak transcription Adipose Nuclei Adipose
35 chr3:135775000-135809600 Weak transcription Fetal Brain Male brain
36 chr3:135775000-135809600 Weak transcription Rectal Mucosa Donor 31 rectum
37 chr3:135775200-135788800 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
38 chr3:135775600-135787400 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
39 chr3:135775600-135788800 Weak transcription Fetal Heart heart
40 chr3:135780600-135789800 Weak transcription Fetal Stomach stomach
41 chr3:135781400-135786400 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
42 chr3:135781400-135786600 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
43 chr3:135781400-135788800 Weak transcription Skeletal Muscle Female skeletal muscle
44 chr3:135781400-135789800 Weak transcription HUES6 Cell Line embryonic stem cell
45 chr3:135781400-135790400 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
46 chr3:135781400-135801600 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
47 chr3:135781400-135802000 Weak transcription Fetal Intestine Small intestine
48 chr3:135781400-135803000 Weak transcription Right Ventricle heart
49 chr3:135781800-135789200 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
50 chr3:135784200-135805600 Weak transcription Stomach Mucosa stomach

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Last update: Aug 31, 2015