The 2.0 version of rSNPBase

Variant report

Variant rs13082684
Chromosome Location chr3:135783166-135783167
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:61 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr3:135746200-135790000 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
2 chr3:135755200-135801400 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
3 chr3:135761000-135802400 Weak transcription iPS-18 Cell Line embryonic stem cell
4 chr3:135761600-135783400 Weak transcription ES-I3 Cell Line embryonic stem cell
5 chr3:135763000-135785600 Weak transcription Brain Anterior Caudate brain
6 chr3:135764400-135790400 Weak transcription Brain Cingulate Gyrus brain
7 chr3:135764800-135790400 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
8 chr3:135765000-135786000 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
9 chr3:135765000-135801800 Weak transcription Esophagus oesophagus
10 chr3:135765600-135784200 Weak transcription Fetal Kidney kidney
11 chr3:135765600-135785400 Weak transcription Pancreas Pancrea
12 chr3:135768800-135800800 Weak transcription HUES64 Cell Line embryonic stem cell
13 chr3:135769800-135789400 Weak transcription Colon Smooth Muscle Colon
14 chr3:135769800-135789800 Weak transcription Psoas Muscle Psoas
15 chr3:135769800-135790000 Weak transcription Aorta Aorta
16 chr3:135769800-135790400 Weak transcription Primary hematopoietic stem cells blood
17 chr3:135770000-135787200 Weak transcription Osteobl bone
18 chr3:135770000-135789800 Weak transcription Duodenum Smooth Muscle Duodenum
19 chr3:135770000-135800800 Weak transcription Fetal Intestine Large intestine
20 chr3:135770400-135789800 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
21 chr3:135771200-135802000 Weak transcription Brain Germinal Matrix brain
22 chr3:135771200-135809600 Weak transcription Gastric stomach
23 chr3:135771400-135789000 Weak transcription HSMMtube muscle
24 chr3:135772600-135789600 Weak transcription Rectal Mucosa Donor 29 rectum
25 chr3:135772600-135789800 Weak transcription Fetal Adrenal Gland Adrenal Gland
26 chr3:135772600-135789800 Weak transcription Ovary ovary
27 chr3:135773000-135787400 Weak transcription Muscle Satellite Cultured Cells --
28 chr3:135774400-135802000 Weak transcription Sigmoid Colon Sigmoid Colon
29 chr3:135774600-135788800 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
30 chr3:135774800-135789000 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
31 chr3:135774800-135789800 Weak transcription Left Ventricle heart
32 chr3:135775000-135785000 Weak transcription HSMM muscle
33 chr3:135775000-135785200 Weak transcription NHDF-Ad bronchial
34 chr3:135775000-135785400 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
35 chr3:135775000-135787600 Weak transcription Rectal Smooth Muscle rectum
36 chr3:135775000-135788800 Weak transcription NHEK skin
37 chr3:135775000-135789200 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
38 chr3:135775000-135789200 Weak transcription Fetal Muscle Trunk muscle
39 chr3:135775000-135789400 Weak transcription Stomach Smooth Muscle stomach
40 chr3:135775000-135789800 Weak transcription Adipose Nuclei Adipose
41 chr3:135775000-135809600 Weak transcription Fetal Brain Male brain
42 chr3:135775000-135809600 Weak transcription Rectal Mucosa Donor 31 rectum
43 chr3:135775200-135785200 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
44 chr3:135775200-135788800 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
45 chr3:135775600-135787400 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
46 chr3:135775600-135788800 Weak transcription Fetal Heart heart
47 chr3:135778800-135785200 Weak transcription Fetal Lung lung
48 chr3:135779400-135785200 Weak transcription Skeletal Muscle Male skeletal muscle
49 chr3:135780600-135789800 Weak transcription Fetal Stomach stomach
50 chr3:135781400-135784600 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived

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Last update: Aug 31, 2015