Variant report

Variant	rs10101451
Chromosome Location	chr8:91664583-91664584
allele	G/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 16 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:16)

rs_ID	r²[population]
rs10089172	0.86[YRI][hapmap];0.82[AFR][1000 genomes];0.89[AMR][1000 genomes]
rs10103441	0.81[ASW][hapmap];0.81[LWK][hapmap];1.00[MEX][hapmap];0.86[YRI][hapmap]
rs11997779	1.00[MEX][hapmap];0.91[MKK][hapmap]
rs16904920	1.00[MEX][hapmap]
rs16905097	0.85[YRI][hapmap];0.82[AFR][1000 genomes];0.89[AMR][1000 genomes]
rs28480323	0.89[AFR][1000 genomes];0.83[AMR][1000 genomes]
rs28517725	0.84[AFR][1000 genomes];0.89[AMR][1000 genomes]
rs28521858	0.89[AFR][1000 genomes];0.94[AMR][1000 genomes]
rs28523907	0.97[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs28533479	0.97[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs28535464	0.89[AMR][1000 genomes]
rs28716641	0.96[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs4513931	0.86[YRI][hapmap];0.82[AFR][1000 genomes];0.89[AMR][1000 genomes]
rs4588812	0.81[ASW][hapmap];0.81[LWK][hapmap];1.00[MEX][hapmap];0.86[YRI][hapmap];0.82[AFR][1000 genomes];0.89[AMR][1000 genomes]
rs58636900	0.82[AFR][1000 genomes];0.89[AMR][1000 genomes]
rs73694518	0.97[AFR][1000 genomes];1.00[AMR][1000 genomes]

No data

Chromatin state (count:6 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr8:91660600-91667400	Weak transcription	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
2	chr8:91662400-91666200	Weak transcription	IMR90 fetal lung fibroblasts Cell Line	lung
3	chr8:91662800-91666400	Weak transcription	H9 Cell Line	embryonic stem cell
4	chr8:91663400-91666000	Weak transcription	HUES48 Cell Line	embryonic stem cell
5	chr8:91663400-91666400	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell
6	chr8:91664400-91665600	ZNF genes & repeats	HUES6 Cell Line	embryonic stem cell

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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