Variant report

Variant	rs73694518
Chromosome Location	chr8:91661462-91661463
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:0)
CpG islands
(count:0)
Chromatin interactive
region (count:6)
LncRNA
region (count:1)
Mature miRNA
region (count: 0)
miRNA target
sites (count:0)

No data

(count:6 , 50 per page) page: 1

No.	Distal block	Cell Line	Cell type
1	chr8:91661390..91663583-chr8:91664437..91667314,2	K562	blood:
2	chr8:91661115..91662955-chr8:91684454..91687038,2	K562	blood:
3	chr8:91658730..91663792-chr8:91996044..91998781,4	K562	blood:
4	chr8:91661285..91662958-chr8:91684783..91686987,2	MCF-7	breast:
5	chr8:91656618..91662321-chr8:91871461..91875565,6	MCF-7	breast:
6	chr8:91661320..91663792-chr8:91996044..91997768,2	K562	blood:

(count:1 , 50 per page) page: 1

No.	lncRNA name	Chromosome Location	lncRNA alias
1	lnc-NECAB1-1	chr8:91660706-91663985	ENSG00000246792

No data

Variant related genes	Relation type
ENSG00000254251	Chromatin interaction
ENSG00000253250	Chromatin interaction

Extended variants
information (count: 13 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:13)

rs_ID	r²[population]
rs10089172	0.81[AFR][1000 genomes];0.89[AMR][1000 genomes]
rs10101451	0.97[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs16905097	0.81[AFR][1000 genomes];0.89[AMR][1000 genomes]
rs28480323	0.91[AFR][1000 genomes];0.83[AMR][1000 genomes]
rs28517725	0.82[AFR][1000 genomes];0.89[AMR][1000 genomes]
rs28521858	0.90[AFR][1000 genomes];0.94[AMR][1000 genomes]
rs28523907	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs28533479	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs28535464	0.89[AMR][1000 genomes]
rs28716641	0.98[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs4513931	0.81[AFR][1000 genomes];0.89[AMR][1000 genomes]
rs4588812	0.81[AFR][1000 genomes];0.89[AMR][1000 genomes]
rs58636900	0.81[AFR][1000 genomes];0.89[AMR][1000 genomes]

No data

Chromatin state (count:28 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr8:91659000-91661600	Weak transcription	Foreskin Keratinocyte Primary Cells skin03	Skin
2	chr8:91659000-91661600	Weak transcription	Liver	Liver
3	chr8:91659200-91661600	Weak transcription	Foreskin Fibroblast Primary Cells skin01	Skin
4	chr8:91659200-91662000	Weak transcription	Cortex derived primary cultured neurospheres	brain
5	chr8:91659200-91662200	Weak transcription	IMR90 fetal lung fibroblasts Cell Line	lung
6	chr8:91659400-91661600	Weak transcription	H9 Cell Line	embryonic stem cell
7	chr8:91659400-91662200	Weak transcription	ES-WA7 Cell Line	embryonic stem cell
8	chr8:91659400-91662800	Weak transcription	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
9	chr8:91659600-91661800	Weak transcription	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
10	chr8:91659800-91661600	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
11	chr8:91659800-91661600	Weak transcription	HUES6 Cell Line	embryonic stem cell
12	chr8:91659800-91661800	Weak transcription	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
13	chr8:91659800-91663600	Enhancers	iPS-15b Cell Line	embryonic stem cell
14	chr8:91660000-91661600	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell
15	chr8:91660000-91661600	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Female	--
16	chr8:91660000-91661600	Weak transcription	Foreskin Fibroblast Primary Cells skin02	Skin
17	chr8:91660400-91662800	Enhancers	ES-I3 Cell Line	embryonic stem cell
18	chr8:91660600-91662200	Weak transcription	K562	blood
19	chr8:91660600-91667400	Weak transcription	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
20	chr8:91661000-91663400	Enhancers	HUES48 Cell Line	embryonic stem cell
21	chr8:91661000-91663800	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Male	--
22	chr8:91661200-91662200	Enhancers	Foreskin Keratinocyte Primary Cells skin02	Skin
23	chr8:91661200-91662400	Enhancers	NHEK	skin
24	chr8:91661200-91662600	Enhancers	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
25	chr8:91661400-91662600	Enhancers	HMEC	breast
26	chr8:91661400-91662800	Enhancers	HUVEC	blood vessel
27	chr8:91661400-91663400	Enhancers	HUES64 Cell Line	embryonic stem cell
28	chr8:91661400-91663800	Enhancers	iPS-20b Cell Line	embryonic stem cell

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