Variant report

Variant	rs4588812
Chromosome Location	chr8:91666895-91666896
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Variant related genes	Relation type
ENSG00000251136	Chromatin interaction
ENSG00000196562	Chromatin interaction
ENSG00000104320	Chromatin interaction
ENSG00000104312	Chromatin interaction

Extended variants
information (count: 16 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:16)

rs_ID	r²[population]
rs10089172	1.00[YRI][hapmap];1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs10099433	0.88[AMR][1000 genomes]
rs10101451	0.81[ASW][hapmap];0.81[LWK][hapmap];1.00[MEX][hapmap];0.86[YRI][hapmap];0.82[AFR][1000 genomes];0.89[AMR][1000 genomes]
rs10103441	1.00[ASW][hapmap];1.00[LWK][hapmap];1.00[MEX][hapmap];0.93[MKK][hapmap];1.00[YRI][hapmap]
rs11997779	1.00[MEX][hapmap]
rs16904920	1.00[MEX][hapmap]
rs16905097	1.00[YRI][hapmap];1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs28480323	0.82[AMR][1000 genomes]
rs28517725	0.97[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs28521858	0.83[AMR][1000 genomes]
rs28523907	0.81[AFR][1000 genomes];0.89[AMR][1000 genomes]
rs28533479	0.81[AFR][1000 genomes];0.89[AMR][1000 genomes]
rs28716641	0.89[AMR][1000 genomes]
rs4513931	1.00[YRI][hapmap];1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs58636900	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73694518	0.81[AFR][1000 genomes];0.89[AMR][1000 genomes]

No data

Chromatin state (count:2 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr8:91660600-91667400	Weak transcription	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
2	chr8:91666800-91677800	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell

Quick Search:

Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

what's new

Quick links