The 2.0 version of rSNPBase

Variant report

Variant rs1011
Chromosome Location chr2:85808736-85808737
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:102 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr2:85805800-85810400 Weak transcription Right Ventricle heart
2 chr2:85805800-85810800 Weak transcription Psoas Muscle Psoas
3 chr2:85806200-85810800 Weak transcription Pancreatic Islets Pancreatic Islet
4 chr2:85806200-85811000 Weak transcription Colon Smooth Muscle Colon
5 chr2:85806200-85811800 Weak transcription A549 lung
6 chr2:85806400-85810800 Weak transcription Left Ventricle heart
7 chr2:85806800-85809000 Weak transcription Hela-S3 cervix
8 chr2:85806800-85810400 Strong transcription Sigmoid Colon Sigmoid Colon
9 chr2:85806800-85810600 Weak transcription HUVEC blood vessel
10 chr2:85806800-85811000 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
11 chr2:85807000-85808800 Weak transcription Primary T helper 17 cells PMA-I stimulated --
12 chr2:85807000-85810000 Genic enhancers Placenta Placenta
13 chr2:85807000-85810600 Weak transcription Fetal Kidney kidney
14 chr2:85807000-85810800 Weak transcription Brain Cingulate Gyrus brain
15 chr2:85807000-85811000 Weak transcription ES-I3 Cell Line embryonic stem cell
16 chr2:85807000-85811000 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
17 chr2:85807000-85811400 Weak transcription Small Intestine intestine
18 chr2:85807200-85808800 Weak transcription Colonic Mucosa Colon
19 chr2:85807200-85810000 Strong transcription Primary T regulatory cells fromperipheralblood blood
20 chr2:85807200-85810400 Weak transcription NHLF lung
21 chr2:85807200-85810800 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
22 chr2:85807200-85811000 Weak transcription Duodenum Smooth Muscle Duodenum
23 chr2:85807400-85809200 Genic enhancers Primary T helper naive cells fromperipheralblood blood
24 chr2:85807400-85810000 Strong transcription Primary mononuclear cells fromperipheralblood Blood
25 chr2:85807400-85810600 Weak transcription Muscle Satellite Cultured Cells --
26 chr2:85807400-85810800 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
27 chr2:85807400-85810800 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
28 chr2:85807400-85810800 Weak transcription Stomach Smooth Muscle stomach
29 chr2:85807400-85810800 Weak transcription HSMMtube muscle
30 chr2:85807400-85811200 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
31 chr2:85807600-85808800 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
32 chr2:85807600-85808800 Weak transcription Fetal Stomach stomach
33 chr2:85807600-85809200 Weak transcription H1 Cell Line embryonic stem cell
34 chr2:85807600-85809400 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
35 chr2:85807600-85809400 Weak transcription Brain Inferior Temporal Lobe brain
36 chr2:85807600-85809400 Weak transcription Brain Substantia Nigra brain
37 chr2:85807600-85809600 Weak transcription Adipose Nuclei Adipose
38 chr2:85807600-85809600 Weak transcription Brain Angular Gyrus brain
39 chr2:85807600-85810000 Strong transcription Primary B cells from peripheral blood blood
40 chr2:85807600-85810400 Strong transcription Primary T cells from cord blood blood
41 chr2:85807600-85810400 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
42 chr2:85807600-85810600 Strong transcription HUES6 Cell Line embryonic stem cell
43 chr2:85807600-85810800 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
44 chr2:85807600-85810800 Strong transcription Breast Myoepithelial Primary Cells Breast
45 chr2:85807600-85810800 Genic enhancers Primary hematopoietic stem cells G-CSF-mobilized Male --
46 chr2:85807600-85810800 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
47 chr2:85807600-85810800 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
48 chr2:85807600-85810800 Weak transcription Fetal Muscle Leg muscle
49 chr2:85807600-85810800 Weak transcription Placenta Amnion Placenta Amnion
50 chr2:85807600-85810800 Weak transcription Skeletal Muscle Male skeletal muscle

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Last update: Aug 31, 2015