Variant report

Variant rs7568458
Chromosome Location chr2:85788175-85788176
allele A/T
Outlinks Ensembl   UCSC
Chromatin state (count:127 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr2:85783200-85788200 Weak transcription Small Intestine intestine
2 chr2:85787000-85788200 Flanking Active TSS Dnd41 blood
3 chr2:85787000-85789400 Active TSS iPS-20b Cell Line embryonic stem cell
4 chr2:85787200-85788200 Flanking Active TSS H9 Derived Neuron Cultured Cells ES cell derived
5 chr2:85787200-85788200 Flanking Active TSS Duodenum Mucosa Duodenum
6 chr2:85787200-85789400 Active TSS HUES6 Cell Line embryonic stem cell
7 chr2:85787200-85789400 Active TSS iPS-15b Cell Line embryonic stem cell
8 chr2:85787200-85789400 Active TSS Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
9 chr2:85787400-85788200 Flanking Active TSS Rectal Smooth Muscle rectum
10 chr2:85787400-85789000 Active TSS Colonic Mucosa Colon
11 chr2:85787400-85789200 Active TSS Foreskin Fibroblast Primary Cells skin01 Skin
12 chr2:85787400-85789200 Active TSS Pancreas Pancrea
13 chr2:85787400-85789200 Bivalent/Poised TSS HepG2 liver
14 chr2:85787400-85789400 Active TSS hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
15 chr2:85787400-85789400 Active TSS Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
16 chr2:85787400-85789400 Active TSS Breast Myoepithelial Primary Cells Breast
17 chr2:85787400-85789400 Active TSS Foreskin Melanocyte Primary Cells skin01 Skin
18 chr2:85787400-85789400 Active TSS A549 lung
19 chr2:85787400-85789400 Active TSS HSMM muscle
20 chr2:85787400-85789400 Active TSS NHLF lung
21 chr2:85787600-85788200 Flanking Active TSS H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
22 chr2:85787600-85788200 Flanking Active TSS Primary T cells from cord blood blood
23 chr2:85787600-85788200 Flanking Active TSS Primary hematopoietic stem cells short term culture blood
24 chr2:85787600-85788200 Flanking Active TSS Primary T helper cells PMA-I stimulated --
25 chr2:85787600-85788200 Flanking Active TSS Cortex derived primary cultured neurospheres brain
26 chr2:85787600-85788200 Flanking Active TSS Brain Cingulate Gyrus brain
27 chr2:85787600-85788200 Flanking Active TSS Brain Germinal Matrix brain
28 chr2:85787600-85788200 Flanking Active TSS Brain Hippocampus Middle brain
29 chr2:85787600-85788200 Flanking Active TSS Brain Inferior Temporal Lobe brain
30 chr2:85787600-85788200 Flanking Active TSS Colon Smooth Muscle Colon
31 chr2:85787600-85788200 Flanking Active TSS Fetal Adrenal Gland Adrenal Gland
32 chr2:85787600-85788200 Flanking Active TSS Fetal Muscle Leg muscle
33 chr2:85787600-85788200 Flanking Active TSS Rectal Mucosa Donor 29 rectum
34 chr2:85787600-85788200 Flanking Active TSS HUVEC blood vessel
35 chr2:85787600-85788200 Flanking Active TSS NHEK skin
36 chr2:85787600-85788400 Flanking Active TSS Primary hematopoietic stem cells G-CSF-mobilized Female --
37 chr2:85787600-85788400 Flanking Active TSS Primary hematopoietic stem cells G-CSF-mobilized Male --
38 chr2:85787600-85788400 Flanking Active TSS Adipose Nuclei Adipose
39 chr2:85787600-85789200 Active TSS H1 Cell Line embryonic stem cell
40 chr2:85787600-85789200 Active TSS H1 Derived Mesenchymal Stem Cells ES cell derived
41 chr2:85787600-85789200 Active TSS IMR90 fetal lung fibroblasts Cell Line lung
42 chr2:85787600-85789400 Active TSS ES-I3 Cell Line embryonic stem cell
43 chr2:85787600-85789400 Active TSS H9 Cell Line embryonic stem cell
44 chr2:85787600-85789400 Active TSS HUES48 Cell Line embryonic stem cell
45 chr2:85787600-85789400 Active TSS HUES64 Cell Line embryonic stem cell
46 chr2:85787600-85789400 Active TSS iPS-18 Cell Line embryonic stem cell
47 chr2:85787600-85789400 Active TSS Foreskin Fibroblast Primary Cells skin02 Skin
48 chr2:85787600-85789600 Active TSS Pancreatic Islets Pancreatic Islet
49 chr2:85787800-85788200 Flanking Active TSS Primary monocytes fromperipheralblood blood
50 chr2:85787800-85788200 Flanking Active TSS Primary hematopoietic stem cells blood

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