The 2.0 version of rSNPBase

Variant report

Variant rs3731827
Chromosome Location chr2:85806068-85806069
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:116 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr2:85804000-85806800 Flanking Active TSS Primary hematopoietic stem cells G-CSF-mobilized Male --
2 chr2:85804200-85807400 Flanking Active TSS Primary hematopoietic stem cells G-CSF-mobilized Female --
3 chr2:85804200-85807600 Flanking Active TSS Monocytes-CD14+_RO01746 blood
4 chr2:85804400-85806400 Flanking Active TSS Primary B cells from peripheral blood blood
5 chr2:85804400-85806600 Flanking Active TSS Primary B cells from cord blood blood
6 chr2:85804400-85806600 Flanking Active TSS Primary T helper cells fromperipheralblood blood
7 chr2:85804400-85806600 Flanking Active TSS HSMM muscle
8 chr2:85804400-85806600 Flanking Active TSS HSMMtube muscle
9 chr2:85804400-85806800 Flanking Active TSS Muscle Satellite Cultured Cells --
10 chr2:85804400-85807000 Flanking Active TSS Primary T cells fromperipheralblood blood
11 chr2:85804400-85807000 Flanking Active TSS Thymus Thymus
12 chr2:85804400-85807400 Flanking Active TSS Primary hematopoietic stem cells blood
13 chr2:85804600-85806400 Flanking Active TSS Skeletal Muscle Female skeletal muscle
14 chr2:85804600-85806600 Flanking Active TSS Primary mononuclear cells fromperipheralblood Blood
15 chr2:85804600-85806600 Flanking Active TSS Adipose Nuclei Adipose
16 chr2:85804600-85806600 Flanking Active TSS Placenta Placenta
17 chr2:85804600-85806600 Enhancers NHDF-Ad bronchial
18 chr2:85804600-85806800 Enhancers IMR90 fetal lung fibroblasts Cell Line lung
19 chr2:85804600-85806800 Flanking Active TSS Fetal Thymus thymus
20 chr2:85804600-85806800 Active TSS Rectal Smooth Muscle rectum
21 chr2:85804600-85807000 Flanking Active TSS Primary neutrophils fromperipheralblood blood
22 chr2:85804600-85807600 Enhancers H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
23 chr2:85804600-85807600 Enhancers Brain Substantia Nigra brain
24 chr2:85804800-85806400 Flanking Active TSS Primary hematopoietic stem cells short term culture blood
25 chr2:85804800-85806400 Enhancers Foreskin Fibroblast Primary Cells skin01 Skin
26 chr2:85804800-85806400 Flanking Active TSS Fetal Muscle Leg muscle
27 chr2:85804800-85806800 Bivalent Enhancer hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
28 chr2:85804800-85807000 Flanking Active TSS NHLF lung
29 chr2:85804800-85807800 Enhancers H9 Derived Neuron Cultured Cells ES cell derived
30 chr2:85805000-85807800 Enhancers Fetal Muscle Trunk muscle
31 chr2:85805200-85806200 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
32 chr2:85805200-85806200 Flanking Active TSS Primary T killer memory cells from peripheral blood blood
33 chr2:85805200-85806600 Enhancers iPS DF 6.9 Cell Line embryonic stem cell
34 chr2:85805200-85806800 Flanking Active TSS Primary T helper memory cells from peripheral blood 1 blood
35 chr2:85805200-85807000 Flanking Active TSS Foreskin Keratinocyte Primary Cells skin02 Skin
36 chr2:85805200-85807000 Enhancers Brain Cingulate Gyrus brain
37 chr2:85805200-85807200 Flanking Active TSS Primary T cells from cord blood blood
38 chr2:85805200-85807400 Flanking Active TSS HUES6 Cell Line embryonic stem cell
39 chr2:85805200-85807400 Enhancers Stomach Smooth Muscle stomach
40 chr2:85805200-85807600 Enhancers Foreskin Fibroblast Primary Cells skin02 Skin
41 chr2:85805200-85807600 Enhancers Fetal Lung lung
42 chr2:85805200-85807800 Enhancers Fetal Adrenal Gland Adrenal Gland
43 chr2:85805400-85806200 Flanking Active TSS Primary Natural Killer cells fromperipheralblood blood
44 chr2:85805400-85806200 Flanking Active TSS Foreskin Keratinocyte Primary Cells skin03 Skin
45 chr2:85805400-85806200 Enhancers Colon Smooth Muscle Colon
46 chr2:85805400-85806400 Flanking Active TSS Primary T helper 17 cells PMA-I stimulated --
47 chr2:85805400-85806400 Enhancers Left Ventricle heart
48 chr2:85805400-85806600 Flanking Active TSS hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
49 chr2:85805400-85806600 Flanking Active TSS Primary T regulatory cells fromperipheralblood blood
50 chr2:85805400-85806800 Enhancers Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow

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Last update: Aug 31, 2015