Variant report

Variant	rs10137516
Chromosome Location	chr14:79192638-79192639
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 15 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:15)

rs_ID	r²[population]
rs10148040	0.88[AFR][1000 genomes];0.95[AMR][1000 genomes];0.81[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs10148134	0.81[ASN][1000 genomes]
rs12431582	0.81[AFR][1000 genomes];0.81[AMR][1000 genomes]
rs12880185	0.85[AMR][1000 genomes]
rs12880418	0.85[AMR][1000 genomes]
rs17757467	0.98[AMR][1000 genomes];0.92[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs2241441	0.83[AFR][1000 genomes];0.88[AMR][1000 genomes];0.83[EUR][1000 genomes]
rs28505980	0.98[AFR][1000 genomes];0.98[AMR][1000 genomes];0.94[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs28728169	0.98[AFR][1000 genomes];0.99[AMR][1000 genomes];0.95[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs35035363	0.98[AMR][1000 genomes];0.92[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs35813445	0.87[AFR][1000 genomes];0.98[AMR][1000 genomes];0.92[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs7148462	0.90[AFR][1000 genomes];0.98[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs8003598	0.90[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs985956	0.95[AFR][1000 genomes];0.95[AMR][1000 genomes];0.93[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs988014	0.92[AFR][1000 genomes];0.97[AMR][1000 genomes];0.82[EUR][1000 genomes];0.96[ASN][1000 genomes]

No data

Chromatin state (count:13 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr14:79189400-79198200	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell
2	chr14:79189600-79193600	Weak transcription	Brain Angular Gyrus	brain
3	chr14:79190000-79200200	Weak transcription	Brain Inferior Temporal Lobe	brain
4	chr14:79191800-79193000	Weak transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
5	chr14:79192000-79193000	Weak transcription	H9 Cell Line	embryonic stem cell
6	chr14:79192000-79194000	Weak transcription	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
7	chr14:79192000-79198200	Weak transcription	H1 Cell Line	embryonic stem cell
8	chr14:79192200-79198400	Weak transcription	ES-I3 Cell Line	embryonic stem cell
9	chr14:79192400-79192800	Weak transcription	HUES6 Cell Line	embryonic stem cell
10	chr14:79192400-79197400	Weak transcription	iPS-18 Cell Line	embryonic stem cell
11	chr14:79192400-79198200	Weak transcription	HUES48 Cell Line	embryonic stem cell
12	chr14:79192400-79198200	Weak transcription	HUES64 Cell Line	embryonic stem cell
13	chr14:79192400-79198200	Weak transcription	iPS-15b Cell Line	embryonic stem cell

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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