Variant report

Variant	rs10142051
Chromosome Location	chr14:64822947-64822948
allele	C/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 16 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:15)

rs_ID	r²[population]
rs10135928	0.85[AMR][1000 genomes]
rs10138188	0.85[AMR][1000 genomes]
rs10141661	0.94[AFR][1000 genomes];1.00[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs10142442	1.00[AMR][1000 genomes]
rs10146291	1.00[EUR][1000 genomes]
rs10151845	0.82[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs2022748	0.84[AFR][1000 genomes];1.00[EUR][1000 genomes]
rs28605559	0.85[AMR][1000 genomes]
rs28859150	0.87[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs57126344	1.00[AMR][1000 genomes]
rs59789110	1.00[EUR][1000 genomes]
rs60554486	0.85[AMR][1000 genomes]
rs7148867	0.94[AFR][1000 genomes];1.00[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs73271893	0.85[AMR][1000 genomes]
rs8011634	0.85[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv902019	chr14:64395569-64882380	Enhancers Strong transcription Flanking Active TSS Weak transcription Flanking Bivalent TSS/Enh Genic enhancers ZNF genes & repeats Bivalent Enhancer Transcr. at gene 5' and 3' Active TSS Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	48 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:2 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr14:64807600-64827400	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
2	chr14:64816400-64853400	Weak transcription	Primary B cells from cord blood	blood

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dbSNP/dbVar ID: rs12345 /nsv7879
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chromosomal regions: chr1:12345-34567

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