Variant report

rSNPs within LD-proxies of this variant (count:20)

rs_ID	r²[population]
rs1155166	0.91[CEU][hapmap];0.81[YRI][hapmap]
rs11628490	0.91[CEU][hapmap]
rs1860152	0.87[CEU][hapmap]
rs2159194	0.81[YRI][hapmap]
rs2238189	0.91[CEU][hapmap]
rs2332835	0.95[CEU][hapmap]
rs4903015	0.95[CEU][hapmap];1.00[CHB][hapmap];0.86[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs4903017	0.90[AFR][1000 genomes];0.84[AMR][1000 genomes];0.85[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs4903020	0.91[CEU][hapmap]
rs7143134	0.91[CEU][hapmap]
rs7143154	0.91[CEU][hapmap]
rs7143912	0.91[CEU][hapmap]
rs7153455	0.95[CEU][hapmap];1.00[CHB][hapmap];0.81[AMR][1000 genomes];0.86[EUR][1000 genomes]
rs7155105	0.87[CEU][hapmap]
rs7158962	0.91[CEU][hapmap]
rs7159534	1.00[CHB][hapmap];0.81[AMR][1000 genomes];0.89[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7160019	1.00[CHB][hapmap]
rs719064	0.91[CEU][hapmap]
rs8018108	1.00[CEU][hapmap];1.00[CHB][hapmap];0.86[YRI][hapmap];0.91[AFR][1000 genomes];0.92[AMR][1000 genomes];0.94[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs9989171	0.95[CEU][hapmap]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv530794	chr14:72113818-73034008	Enhancers Bivalent/Poised TSS Weak transcription Strong transcription Flanking Active TSS Genic enhancers Bivalent Enhancer Active TSS Flanking Bivalent TSS/Enh ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA	8 gene(s)	inside rSNPs	diseases
2	nsv948800	chr14:72462557-73150701	Enhancers Bivalent Enhancer Weak transcription Strong transcription Flanking Active TSS Genic enhancers ZNF genes & repeats Active TSS Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA	11 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:18 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr14:72891000-72908600	Weak transcription	Left Ventricle	heart
2	chr14:72899200-72901600	Weak transcription	HSMMtube	muscle
3	chr14:72900400-72902800	Enhancers	HUES6 Cell Line	embryonic stem cell
4	chr14:72900600-72901400	Enhancers	Cortex derived primary cultured neurospheres	brain
5	chr14:72900600-72901600	Weak transcription	iPS-20b Cell Line	embryonic stem cell
6	chr14:72900600-72902600	Enhancers	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
7	chr14:72900800-72904400	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
8	chr14:72901000-72902000	Enhancers	HUES48 Cell Line	embryonic stem cell
9	chr14:72901000-72902400	Enhancers	ES-I3 Cell Line	embryonic stem cell
10	chr14:72901000-72902800	Enhancers	iPS-15b Cell Line	embryonic stem cell
11	chr14:72901200-72901400	Enhancers	ES-WA7 Cell Line	embryonic stem cell
12	chr14:72901200-72901400	Weak transcription	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
13	chr14:72901200-72901600	Weak transcription	Ganglion Eminence derived primary cultured neurospheres	brain
14	chr14:72901200-72901800	Enhancers	H1 Cell Line	embryonic stem cell
15	chr14:72901200-72902000	Enhancers	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
16	chr14:72901200-72902200	Enhancers	ES-UCSF4 Cell Line	embryonic stem cell
17	chr14:72901200-72902400	Enhancers	HUES64 Cell Line	embryonic stem cell
18	chr14:72901200-72906800	Enhancers	Dnd41	blood

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