Variant report

Variant rs10153265
Chromosome Location chr17:38629544-38629545
allele A/T
Outlinks Ensembl   UCSC
Chromatin state (count:49 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr17:38619200-38632000 Weak transcription Right Atrium heart
2 chr17:38620600-38632200 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
3 chr17:38626400-38629800 Enhancers NHEK skin
4 chr17:38626600-38630000 Enhancers HMEC breast
5 chr17:38626600-38631600 Enhancers Fetal Stomach stomach
6 chr17:38627000-38633000 Enhancers Rectal Smooth Muscle rectum
7 chr17:38627200-38631800 Enhancers Placenta Placenta
8 chr17:38627200-38631800 Enhancers Hela-S3 cervix
9 chr17:38627200-38632000 Enhancers Breast Myoepithelial Primary Cells Breast
10 chr17:38627200-38632400 Enhancers HUES6 Cell Line embryonic stem cell
11 chr17:38627200-38633000 Enhancers Colon Smooth Muscle Colon
12 chr17:38627200-38633400 Enhancers IMR90 fetal lung fibroblasts Cell Line lung
13 chr17:38627200-38633400 Enhancers Ovary ovary
14 chr17:38627400-38630000 Enhancers Placenta Amnion Placenta Amnion
15 chr17:38627400-38633200 Enhancers Duodenum Smooth Muscle Duodenum
16 chr17:38627400-38646200 Weak transcription Gastric stomach
17 chr17:38627600-38630800 Weak transcription Spleen Spleen
18 chr17:38627600-38632800 Enhancers Liver Liver
19 chr17:38627800-38629600 Weak transcription Duodenum Mucosa Duodenum
20 chr17:38627800-38629800 Weak transcription Fetal Intestine Large intestine
21 chr17:38627800-38630800 Weak transcription iPS-18 Cell Line embryonic stem cell
22 chr17:38627800-38630800 Enhancers A549 lung
23 chr17:38627800-38631000 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
24 chr17:38627800-38631400 Weak transcription Fetal Lung lung
25 chr17:38628000-38630400 Weak transcription ES-I3 Cell Line embryonic stem cell
26 chr17:38628000-38630600 Weak transcription K562 blood
27 chr17:38628200-38630600 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
28 chr17:38628400-38630200 Enhancers Esophagus oesophagus
29 chr17:38628400-38630600 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
30 chr17:38628400-38631000 Weak transcription Fetal Intestine Small intestine
31 chr17:38628600-38630800 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
32 chr17:38628600-38632800 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
33 chr17:38628800-38629800 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
34 chr17:38628800-38631800 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
35 chr17:38628800-38632000 Weak transcription Muscle Satellite Cultured Cells --
36 chr17:38628800-38632200 Weak transcription NH-A brain
37 chr17:38628800-38636400 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
38 chr17:38629000-38630000 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
39 chr17:38629000-38630800 Weak transcription iPS-20b Cell Line embryonic stem cell
40 chr17:38629000-38631800 Weak transcription NHLF lung
41 chr17:38629000-38631800 Weak transcription Osteobl bone
42 chr17:38629000-38632000 Weak transcription ES-WA7 Cell Line embryonic stem cell
43 chr17:38629200-38630000 Enhancers Rectal Mucosa Donor 31 rectum
44 chr17:38629200-38630000 Bivalent Enhancer HepG2 liver
45 chr17:38629200-38632800 Enhancers Stomach Mucosa stomach
46 chr17:38629400-38629600 Flanking Active TSS Stomach Smooth Muscle stomach
47 chr17:38629400-38630200 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
48 chr17:38629400-38632000 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
49 chr17:38629400-38632000 Weak transcription NHDF-Ad bronchial

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