Variant report
| Variant | rs10165488 |
|---|---|
| Chromosome Location | chr2:189922737-189922738 |
| allele | C/G |
| Outlinks | Ensembl UCSC |
| No. | Chromosome Location | Chromatin state | Cell line | Tissue |
|---|---|---|---|---|
| 1 | chr2:189889800-189931000 | Weak transcription | Esophagus | oesophagus |
| 2 | chr2:189893200-189932600 | Weak transcription | Sigmoid Colon | Sigmoid Colon |
| 3 | chr2:189894600-189932800 | Weak transcription | Right Ventricle | heart |
| 4 | chr2:189895200-189940800 | Strong transcription | HSMM | muscle |
| 5 | chr2:189895600-189965200 | Strong transcription | hESC Derived CD184+ Endoderm Cultured Cells | ES cell derived |
| 6 | chr2:189896200-189962400 | Weak transcription | Left Ventricle | heart |
| 7 | chr2:189896800-189932800 | Weak transcription | Pancreas | Pancrea |
| 8 | chr2:189897000-189949000 | Weak transcription | HUES64 Cell Line | embryonic stem cell |
| 9 | chr2:189897200-189934400 | Weak transcription | Gastric | stomach |
| 10 | chr2:189897400-189932400 | Weak transcription | Skeletal Muscle Male | skeletal muscle |
| 11 | chr2:189897600-189934000 | Weak transcription | Lung | lung |
| 12 | chr2:189898400-189938200 | Weak transcription | HMEC | breast |
| 13 | chr2:189899000-189925000 | Weak transcription | Foreskin Keratinocyte Primary Cells skin03 | Skin |
| 14 | chr2:189899000-189939200 | Weak transcription | H9 Derived Neuron Cultured Cells | ES cell derived |
| 15 | chr2:189900800-189964400 | Weak transcription | ES-WA7 Cell Line | embryonic stem cell |
| 16 | chr2:189901200-189947400 | Weak transcription | Fetal Brain Male | brain |
| 17 | chr2:189902600-189937000 | Strong transcription | NH-A | brain |
| 18 | chr2:189904000-189938200 | Weak transcription | iPS-20b Cell Line | embryonic stem cell |
| 19 | chr2:189904400-189926800 | Weak transcription | Fetal Intestine Small | intestine |
| 20 | chr2:189904400-189934400 | Weak transcription | Cortex derived primary cultured neurospheres | brain |
| 21 | chr2:189904400-189951000 | Weak transcription | Fetal Adrenal Gland | Adrenal Gland |
| 22 | chr2:189904600-189932400 | Weak transcription | Rectal Mucosa Donor 29 | rectum |
| 23 | chr2:189906400-189925400 | Weak transcription | Skeletal Muscle Female | skeletal muscle |
| 24 | chr2:189907800-189929200 | Weak transcription | Liver | Liver |
| 25 | chr2:189908000-189927800 | Weak transcription | Placenta Amnion | Placenta Amnion |
| 26 | chr2:189909200-189936200 | Weak transcription | Small Intestine | intestine |
| 27 | chr2:189909800-189934200 | Strong transcription | hESC Derived CD56+ Mesoderm Cultured Cells | ES cell derived |
| 28 | chr2:189911400-189926600 | Strong transcription | HSMMtube | muscle |
| 29 | chr2:189911800-189923400 | Strong transcription | Fetal Muscle Trunk | muscle |
| 30 | chr2:189912400-189961600 | Weak transcription | ES-I3 Cell Line | embryonic stem cell |
| 31 | chr2:189912800-189931200 | Weak transcription | Colonic Mucosa | Colon |
| 32 | chr2:189914000-189932800 | Weak transcription | Fetal Kidney | kidney |
| 33 | chr2:189914400-189937000 | Strong transcription | Adipose Nuclei | Adipose |
| 34 | chr2:189914800-189946800 | Weak transcription | Rectal Smooth Muscle | rectum |
| 35 | chr2:189915000-189924600 | Strong transcription | Muscle Satellite Cultured Cells | -- |
| 36 | chr2:189915000-189950600 | Strong transcription | Bone Marrow Derived Cultured Mesenchymal Stem Cells | Bone marrow |
| 37 | chr2:189915400-189938200 | Weak transcription | Brain Dorsolateral Prefrontal Cortex | brain |
| 38 | chr2:189915400-189951000 | Strong transcription | Osteobl | bone |
| 39 | chr2:189915800-189923600 | Strong transcription | A549 | lung |
| 40 | chr2:189916200-189929200 | Weak transcription | H1 Derived Mesenchymal Stem Cells | ES cell derived |
| 41 | chr2:189916200-189947600 | Weak transcription | Spleen | Spleen |
| 42 | chr2:189917800-189927400 | Weak transcription | Breast Myoepithelial Primary Cells | Breast |
| 43 | chr2:189917800-189929200 | Weak transcription | Aorta | Aorta |
| 44 | chr2:189917800-189929400 | Weak transcription | Placenta | Placenta |
| 45 | chr2:189917800-189932600 | Weak transcription | H1 BMP4 Derived Trophoblast Cultured Cells | ES cell derived |
| 46 | chr2:189917800-189934400 | Weak transcription | H9 Cell Line | embryonic stem cell |
| 47 | chr2:189919000-189924600 | Weak transcription | Colon Smooth Muscle | Colon |
| 48 | chr2:189919000-189924600 | Weak transcription | Ovary | ovary |
| 49 | chr2:189919000-189927600 | Weak transcription | Fetal Intestine Large | intestine |
| 50 | chr2:189919000-189930200 | Weak transcription | HUES6 Cell Line | embryonic stem cell |
