The 2.0 version of rSNPBase

Variant report

Variant rs13383366
Chromosome Location chr2:189913830-189913831
allele G/T
Outlinks Ensembl   UCSC
Chromatin state (count:73 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr2:189888000-189917400 Weak transcription Ovary ovary
2 chr2:189889800-189931000 Weak transcription Esophagus oesophagus
3 chr2:189893200-189932600 Weak transcription Sigmoid Colon Sigmoid Colon
4 chr2:189893600-189916200 Weak transcription Rectal Mucosa Donor 31 rectum
5 chr2:189894600-189932800 Weak transcription Right Ventricle heart
6 chr2:189895200-189940800 Strong transcription HSMM muscle
7 chr2:189895600-189965200 Strong transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
8 chr2:189896200-189962400 Weak transcription Left Ventricle heart
9 chr2:189896400-189922600 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
10 chr2:189896800-189932800 Weak transcription Pancreas Pancrea
11 chr2:189897000-189949000 Weak transcription HUES64 Cell Line embryonic stem cell
12 chr2:189897200-189934400 Weak transcription Gastric stomach
13 chr2:189897400-189917400 Weak transcription H9 Cell Line embryonic stem cell
14 chr2:189897400-189932400 Weak transcription Skeletal Muscle Male skeletal muscle
15 chr2:189897600-189934000 Weak transcription Lung lung
16 chr2:189898400-189938200 Weak transcription HMEC breast
17 chr2:189899000-189916000 Weak transcription Aorta Aorta
18 chr2:189899000-189919000 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
19 chr2:189899000-189925000 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
20 chr2:189899000-189939200 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
21 chr2:189900800-189964400 Weak transcription ES-WA7 Cell Line embryonic stem cell
22 chr2:189901000-189914200 Strong transcription IMR90 fetal lung fibroblasts Cell Line lung
23 chr2:189901000-189919000 Strong transcription Foreskin Melanocyte Primary Cells skin03 Skin
24 chr2:189901200-189947400 Weak transcription Fetal Brain Male brain
25 chr2:189902400-189921600 Strong transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
26 chr2:189902600-189914600 Strong transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
27 chr2:189902600-189937000 Strong transcription NH-A brain
28 chr2:189902800-189914400 Strong transcription Muscle Satellite Cultured Cells --
29 chr2:189902800-189914800 Strong transcription Osteobl bone
30 chr2:189904000-189938200 Weak transcription iPS-20b Cell Line embryonic stem cell
31 chr2:189904400-189915800 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
32 chr2:189904400-189916000 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
33 chr2:189904400-189921200 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
34 chr2:189904400-189926800 Weak transcription Fetal Intestine Small intestine
35 chr2:189904400-189934400 Weak transcription Cortex derived primary cultured neurospheres brain
36 chr2:189904400-189951000 Weak transcription Fetal Adrenal Gland Adrenal Gland
37 chr2:189904600-189932400 Weak transcription Rectal Mucosa Donor 29 rectum
38 chr2:189906000-189918000 Weak transcription Brain Angular Gyrus brain
39 chr2:189906400-189914000 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
40 chr2:189906400-189914400 Weak transcription Duodenum Smooth Muscle Duodenum
41 chr2:189906400-189925400 Weak transcription Skeletal Muscle Female skeletal muscle
42 chr2:189906600-189914800 Weak transcription Breast Myoepithelial Primary Cells Breast
43 chr2:189907600-189914000 Weak transcription Fetal Intestine Large intestine
44 chr2:189907800-189915800 Weak transcription HUES6 Cell Line embryonic stem cell
45 chr2:189907800-189929200 Weak transcription Liver Liver
46 chr2:189908000-189916000 Weak transcription Placenta Placenta
47 chr2:189908000-189927800 Weak transcription Placenta Amnion Placenta Amnion
48 chr2:189909000-189921200 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
49 chr2:189909200-189936200 Weak transcription Small Intestine intestine
50 chr2:189909800-189919000 Strong transcription NHDF-Ad bronchial

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Last update: Aug 31, 2015