The 2.0 version of rSNPBase

Variant report

Variant rs13382234
Chromosome Location chr2:189935242-189935243
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:61 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr2:189895200-189940800 Strong transcription HSMM muscle
2 chr2:189895600-189965200 Strong transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
3 chr2:189896200-189962400 Weak transcription Left Ventricle heart
4 chr2:189897000-189949000 Weak transcription HUES64 Cell Line embryonic stem cell
5 chr2:189898400-189938200 Weak transcription HMEC breast
6 chr2:189899000-189939200 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
7 chr2:189900800-189964400 Weak transcription ES-WA7 Cell Line embryonic stem cell
8 chr2:189901200-189947400 Weak transcription Fetal Brain Male brain
9 chr2:189902600-189937000 Strong transcription NH-A brain
10 chr2:189904000-189938200 Weak transcription iPS-20b Cell Line embryonic stem cell
11 chr2:189904400-189951000 Weak transcription Fetal Adrenal Gland Adrenal Gland
12 chr2:189909200-189936200 Weak transcription Small Intestine intestine
13 chr2:189912400-189961600 Weak transcription ES-I3 Cell Line embryonic stem cell
14 chr2:189914400-189937000 Strong transcription Adipose Nuclei Adipose
15 chr2:189914800-189946800 Weak transcription Rectal Smooth Muscle rectum
16 chr2:189915000-189950600 Strong transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
17 chr2:189915400-189938200 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
18 chr2:189915400-189951000 Strong transcription Osteobl bone
19 chr2:189916200-189947600 Weak transcription Spleen Spleen
20 chr2:189921800-189935400 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
21 chr2:189922000-189938000 Strong transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
22 chr2:189922800-189980800 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
23 chr2:189925600-189940600 Weak transcription Skeletal Muscle Female skeletal muscle
24 chr2:189928200-189940800 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
25 chr2:189929400-189941000 Weak transcription Duodenum Mucosa Duodenum
26 chr2:189929600-189951400 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
27 chr2:189929800-189935400 Weak transcription Placenta Placenta
28 chr2:189931200-189941200 Weak transcription Breast Myoepithelial Primary Cells Breast
29 chr2:189931400-189937000 Strong transcription NHDF-Ad bronchial
30 chr2:189931400-189940600 Strong transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
31 chr2:189931600-189935600 Weak transcription Stomach Smooth Muscle stomach
32 chr2:189932400-189937000 Strong transcription Muscle Satellite Cultured Cells --
33 chr2:189932600-189936600 Strong transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
34 chr2:189932600-189937000 Strong transcription Fetal Muscle Trunk muscle
35 chr2:189933000-189935400 Weak transcription Sigmoid Colon Sigmoid Colon
36 chr2:189933000-189938600 Weak transcription HUES6 Cell Line embryonic stem cell
37 chr2:189933000-189940600 Strong transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
38 chr2:189933000-189941000 Weak transcription Ovary ovary
39 chr2:189933000-189960400 Weak transcription Placenta Amnion Placenta Amnion
40 chr2:189933000-189980200 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
41 chr2:189933200-189946800 Weak transcription Fetal Kidney kidney
42 chr2:189933800-189935400 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
43 chr2:189933800-189935600 Weak transcription Fetal Intestine Large intestine
44 chr2:189933800-189939000 Weak transcription HUVEC blood vessel
45 chr2:189933800-189941200 Weak transcription Aorta Aorta
46 chr2:189933800-189947400 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
47 chr2:189933800-189947400 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
48 chr2:189933800-189957800 Weak transcription Fetal Intestine Small intestine
49 chr2:189934000-189935400 Weak transcription Fetal Muscle Leg muscle
50 chr2:189934000-189935400 Weak transcription NHLF lung

Quick Search:


  
Input of quick search could be:

what's new

Quick links

Copyright © 2015, Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences. All Rights Reserved Feedback
Last update: Aug 31, 2015