Variant report

Variant	rs10167914
Chromosome Location	chr2:113563361-113563362
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr2:113559153..113561082-chr2:113563115..113564715,3	K562	blood:
2	chr2:113554700..113558289-chr2:113562996..113565231,3	K562	blood:

Extended variants
information (count: 36 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:36)

rs_ID	r²[population]
rs10496444	1.00[CEU][hapmap];0.91[CHB][hapmap];1.00[JPT][hapmap];0.82[AMR][1000 genomes];0.92[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs10496445	1.00[CEU][hapmap];0.91[CHB][hapmap];0.94[JPT][hapmap];0.81[AMR][1000 genomes];0.92[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs11676014	0.97[ASN][1000 genomes]
rs11687624	0.93[ASN][1000 genomes]
rs12471565	0.95[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.96[AMR][1000 genomes];0.99[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs12478842	0.96[CEU][hapmap];0.91[CHB][hapmap];0.94[JPT][hapmap];0.81[AMR][1000 genomes];0.92[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs12612788	0.82[AMR][1000 genomes];0.93[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs12711741	1.00[CEU][hapmap];0.91[CHB][hapmap];1.00[JPT][hapmap];0.82[AMR][1000 genomes];0.92[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs13000462	0.86[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs13009294	1.00[CEU][hapmap];0.91[CHB][hapmap];1.00[JPT][hapmap];0.82[AMR][1000 genomes];0.92[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs13015273	0.82[CHB][hapmap]
rs13016817	0.82[CHB][hapmap]
rs13027814	0.91[CHB][hapmap];0.94[JPT][hapmap];0.81[AMR][1000 genomes];0.92[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs1533463	0.81[AMR][1000 genomes];0.89[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs1609682	1.00[CEU][hapmap];0.91[CHB][hapmap];0.94[JPT][hapmap];0.81[AMR][1000 genomes];0.89[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs1969294	0.81[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs2071373	1.00[CEU][hapmap];0.91[CHB][hapmap];0.94[JPT][hapmap];0.89[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs2071376	0.81[AMR][1000 genomes];0.89[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs35145107	0.84[EUR][1000 genomes]
rs3783512	0.81[AMR][1000 genomes];0.91[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs3783513	0.81[AMR][1000 genomes];0.92[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs3783521	1.00[CEU][hapmap];0.91[CHB][hapmap];0.94[JPT][hapmap];0.90[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs3783525	1.00[CEU][hapmap];0.91[CHB][hapmap];0.94[JPT][hapmap];0.81[AMR][1000 genomes];0.91[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs3783526	1.00[CEU][hapmap];0.91[CHB][hapmap];0.94[JPT][hapmap];0.90[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs3783533	0.81[AMR][1000 genomes];0.89[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs3783539	0.89[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs3783543	0.81[AMR][1000 genomes];0.89[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs3783546	1.00[CEU][hapmap];0.91[CHB][hapmap];0.94[JPT][hapmap];0.81[AMR][1000 genomes];0.89[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs3783550	1.00[CEU][hapmap];0.91[CHB][hapmap];0.94[JPT][hapmap];0.81[AMR][1000 genomes];0.89[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs4402765	0.92[AMR][1000 genomes];0.98[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs4848301	1.00[CEU][hapmap];0.91[CHB][hapmap];0.94[JPT][hapmap];0.81[AMR][1000 genomes];0.91[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs4848302	1.00[CEU][hapmap];0.91[CHB][hapmap];0.94[JPT][hapmap];0.81[AMR][1000 genomes];0.92[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs6542095	1.00[CEU][hapmap];0.91[CHB][hapmap];0.94[JPT][hapmap];0.89[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs7369378	0.93[ASN][1000 genomes]
rs74182856	0.93[AMR][1000 genomes];0.99[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs7567619	0.95[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.90[YRI][hapmap]

No data

Chromatin state (count:19 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr2:113560600-113563600	Enhancers	HMEC	breast
2	chr2:113561200-113563600	Enhancers	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
3	chr2:113561400-113563600	Enhancers	Foreskin Keratinocyte Primary Cells skin03	Skin
4	chr2:113561600-113563600	Enhancers	IMR90 fetal lung fibroblasts Cell Line	lung
5	chr2:113561800-113563600	Enhancers	HepG2	liver
6	chr2:113562200-113563400	Enhancers	H9 Derived Neuron Cultured Cells	ES cell derived
7	chr2:113562200-113563400	Weak transcription	K562	blood
8	chr2:113562800-113563400	Enhancers	Placenta Amnion	Placenta Amnion
9	chr2:113562800-113563600	Enhancers	Primary B cells from peripheral blood	blood
10	chr2:113562800-113563600	Enhancers	Esophagus	oesophagus
11	chr2:113562800-113563600	Flanking Active TSS	GM12878-XiMat	blood
12	chr2:113562800-113563600	Flanking Active TSS	NHEK	skin
13	chr2:113563000-113563400	Enhancers	Breast Myoepithelial Primary Cells	Breast
14	chr2:113563000-113563600	Enhancers	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
15	chr2:113563000-113563600	Enhancers	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
16	chr2:113563200-113563400	ZNF genes & repeats	iPS DF 19.11 Cell Line	embryonic stem cell
17	chr2:113563200-113563400	Enhancers	Foreskin Fibroblast Primary Cells skin01	Skin
18	chr2:113563200-113563600	Enhancers	H1 Derived Mesenchymal Stem Cells	ES cell derived
19	chr2:113563200-113563600	Enhancers	Foreskin Keratinocyte Primary Cells skin02	Skin

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