Variant report

Variant	rs74182856
Chromosome Location	chr2:113567532-113567533
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr2:113515687..113518345-chr2:113566217..113568587,2	K562	blood:

Extended variants
information (count: 33 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:33)

rs_ID	r²[population]
rs10167914	0.93[AMR][1000 genomes];0.99[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs10496444	0.92[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs10496445	0.92[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs11676014	0.92[ASN][1000 genomes]
rs11687624	0.89[ASN][1000 genomes]
rs12471565	0.98[AMR][1000 genomes];1.00[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs12478842	0.92[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs12612788	0.86[AMR][1000 genomes];0.94[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs12711741	0.92[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs13000462	0.86[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs13009294	0.92[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs13027814	0.92[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs1533463	0.89[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs1609682	0.89[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs1969294	0.80[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs2071373	0.81[AFR][1000 genomes];0.81[AMR][1000 genomes];0.89[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs2071376	0.89[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs35145107	0.85[EUR][1000 genomes]
rs3783512	0.90[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs3783513	0.91[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs3783521	0.81[AFR][1000 genomes];0.81[AMR][1000 genomes];0.91[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs3783525	0.90[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs3783526	0.81[AFR][1000 genomes];0.81[AMR][1000 genomes];0.91[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs3783533	0.89[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs3783539	0.81[AFR][1000 genomes];0.81[AMR][1000 genomes];0.89[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs3783543	0.89[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs3783546	0.89[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs3783550	0.89[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs4402765	0.94[AMR][1000 genomes];0.99[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs4848301	0.90[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs4848302	0.92[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs6542095	0.89[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs7369378	0.89[ASN][1000 genomes]

No data

Chromatin state (count:22 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr2:113563400-113569200	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
2	chr2:113563600-113569000	Weak transcription	Esophagus	oesophagus
3	chr2:113563600-113569200	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
4	chr2:113565400-113568800	Weak transcription	Foreskin Keratinocyte Primary Cells skin03	Skin
5	chr2:113565600-113569000	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
6	chr2:113565800-113568000	Enhancers	HepG2	liver
7	chr2:113566400-113567600	Enhancers	Primary monocytes fromperipheralblood	blood
8	chr2:113566400-113572400	Enhancers	Fetal Adrenal Gland	Adrenal Gland
9	chr2:113566600-113569200	Weak transcription	Small Intestine	intestine
10	chr2:113567200-113568600	Weak transcription	Foreskin Keratinocyte Primary Cells skin02	Skin
11	chr2:113567200-113569400	Weak transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
12	chr2:113567400-113568600	Weak transcription	Breast Myoepithelial Primary Cells	Breast
13	chr2:113567400-113568800	Weak transcription	Fetal Lung	lung
14	chr2:113567400-113568800	Weak transcription	Monocytes-CD14+_RO01746	blood
15	chr2:113567400-113569000	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Female	--
16	chr2:113567400-113569000	Weak transcription	Pancreas	Pancrea
17	chr2:113567400-113569000	Weak transcription	Sigmoid Colon	Sigmoid Colon
18	chr2:113567400-113569200	Weak transcription	iPS DF 6.9 Cell Line	embryonic stem cell
19	chr2:113567400-113569200	Weak transcription	Brain Cingulate Gyrus	brain
20	chr2:113567400-113569400	Weak transcription	Liver	Liver
21	chr2:113567400-113570000	Weak transcription	Brain Hippocampus Middle	brain
22	chr2:113567400-113575800	Weak transcription	Brain Substantia Nigra	brain

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