Variant report

Variant rs10180688
Chromosome Location chr2:100004176-100004177
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:125 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr2:99956200-100004800 Weak transcription Fetal Heart heart
2 chr2:99975400-100006400 Weak transcription Stomach Mucosa stomach
3 chr2:99976200-100004400 Strong transcription Foreskin Keratinocyte Primary Cells skin03 Skin
4 chr2:99976600-100004800 Strong transcription Primary B cells from peripheral blood blood
5 chr2:99978200-100011800 Weak transcription Esophagus oesophagus
6 chr2:99979400-100004200 Strong transcription Fetal Thymus thymus
7 chr2:99979600-100009600 Strong transcription Foreskin Melanocyte Primary Cells skin03 Skin
8 chr2:99983200-100013600 Weak transcription ES-WA7 Cell Line embryonic stem cell
9 chr2:99985600-100006800 Weak transcription Colonic Mucosa Colon
10 chr2:99990000-100006600 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
11 chr2:99990000-100012200 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
12 chr2:99990200-100010800 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
13 chr2:99990600-100006600 Weak transcription Pancreas Pancrea
14 chr2:99990600-100010800 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
15 chr2:99990600-100010800 Weak transcription Spleen Spleen
16 chr2:99990800-100004600 Strong transcription Primary monocytes fromperipheralblood blood
17 chr2:99990800-100007000 Weak transcription Gastric stomach
18 chr2:99993200-100006600 Weak transcription H9 Cell Line embryonic stem cell
19 chr2:99994200-100010000 Weak transcription Brain Substantia Nigra brain
20 chr2:99994200-100010800 Weak transcription Fetal Brain Male brain
21 chr2:99994200-100011400 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
22 chr2:99996600-100009400 Weak transcription Placenta Amnion Placenta Amnion
23 chr2:99996800-100010000 Weak transcription Small Intestine intestine
24 chr2:99997200-100009000 Weak transcription Skeletal Muscle Male skeletal muscle
25 chr2:99997200-100011000 Weak transcription iPS-15b Cell Line embryonic stem cell
26 chr2:99998800-100007000 Weak transcription Primary T helper naive cells from peripheral blood blood
27 chr2:99999000-100006600 Weak transcription Primary T killer memory cells from peripheral blood blood
28 chr2:99999200-100008800 Strong transcription HepG2 liver
29 chr2:99999400-100056800 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
30 chr2:99999600-100006600 Weak transcription HMEC breast
31 chr2:100000000-100006000 Weak transcription HUVEC blood vessel
32 chr2:100000000-100014800 Weak transcription Psoas Muscle Psoas
33 chr2:100000200-100006200 Weak transcription Hela-S3 cervix
34 chr2:100000200-100006600 Weak transcription NHEK skin
35 chr2:100000200-100007000 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
36 chr2:100000400-100005200 Weak transcription HSMM muscle
37 chr2:100000400-100006600 Weak transcription Brain Anterior Caudate brain
38 chr2:100000400-100006800 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
39 chr2:100000400-100007000 Weak transcription Brain Cingulate Gyrus brain
40 chr2:100000400-100009400 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
41 chr2:100001000-100004400 Weak transcription Primary B cells from cord blood blood
42 chr2:100001000-100005600 Weak transcription NHDF-Ad bronchial
43 chr2:100001000-100007000 Weak transcription Fetal Kidney kidney
44 chr2:100001000-100022000 Weak transcription Pancreatic Islets Pancreatic Islet
45 chr2:100001200-100005400 Weak transcription Osteobl bone
46 chr2:100001200-100006400 Weak transcription Primary T killer naive cells fromperipheralblood blood
47 chr2:100001200-100006600 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
48 chr2:100001200-100006600 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
49 chr2:100001200-100007000 Weak transcription Brain Germinal Matrix brain
50 chr2:100001200-100007000 Weak transcription Brain Inferior Temporal Lobe brain

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