The 2.0 version of rSNPBase

Variant report

Variant rs11123783
Chromosome Location chr2:99959953-99959954
allele G/T
Outlinks Ensembl   UCSC
Chromatin state (count:61 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr2:99955000-99964800 Weak transcription Sigmoid Colon Sigmoid Colon
2 chr2:99955000-99965400 Weak transcription Gastric stomach
3 chr2:99955000-99977000 Weak transcription Primary Natural Killer cells fromperipheralblood blood
4 chr2:99955000-99979200 Weak transcription Fetal Stomach stomach
5 chr2:99955000-99979800 Weak transcription Fetal Muscle Trunk muscle
6 chr2:99955200-99961600 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
7 chr2:99955200-99974400 Weak transcription Thymus Thymus
8 chr2:99955200-99979600 Weak transcription Duodenum Smooth Muscle Duodenum
9 chr2:99955200-99982600 Weak transcription Fetal Brain Male brain
10 chr2:99955400-99964400 Weak transcription Primary T killer memory cells from peripheral blood blood
11 chr2:99955400-99970000 Weak transcription NHDF-Ad bronchial
12 chr2:99955400-99976800 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
13 chr2:99955400-99979600 Weak transcription Primary hematopoietic stem cells blood
14 chr2:99955400-99979600 Weak transcription NH-A brain
15 chr2:99955600-99964600 Weak transcription Primary T regulatory cells fromperipheralblood blood
16 chr2:99955600-99978200 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
17 chr2:99955800-99961600 Weak transcription Brain Hippocampus Middle brain
18 chr2:99955800-99976800 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
19 chr2:99956000-99963800 Weak transcription Primary T cells from cord blood blood
20 chr2:99956000-99976400 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
21 chr2:99956200-99964600 Weak transcription Primary T helper 17 cells PMA-I stimulated --
22 chr2:99956200-99970200 Weak transcription Osteobl bone
23 chr2:99956200-99976600 Weak transcription Primary T cells fromperipheralblood blood
24 chr2:99956200-99977600 Weak transcription Fetal Thymus thymus
25 chr2:99956200-100004800 Weak transcription Fetal Heart heart
26 chr2:99956400-99962000 Weak transcription Breast Myoepithelial Primary Cells Breast
27 chr2:99956400-99962200 Weak transcription Primary T helper naive cells from peripheral blood blood
28 chr2:99956400-99964400 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
29 chr2:99956400-99979600 Weak transcription Rectal Mucosa Donor 29 rectum
30 chr2:99956400-99979600 Weak transcription HUVEC blood vessel
31 chr2:99956600-99977200 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
32 chr2:99956800-99962400 Weak transcription Primary T helper naive cells fromperipheralblood blood
33 chr2:99956800-99966800 Weak transcription Primary hematopoietic stem cells short term culture blood
34 chr2:99957000-99964000 Weak transcription Primary T killer naive cells fromperipheralblood blood
35 chr2:99957000-99977200 Weak transcription Dnd41 blood
36 chr2:99957000-99978000 Weak transcription Small Intestine intestine
37 chr2:99957400-99978200 Weak transcription Primary mononuclear cells fromperipheralblood Blood
38 chr2:99957600-99960600 Weak transcription Left Ventricle heart
39 chr2:99957600-99973000 Weak transcription Psoas Muscle Psoas
40 chr2:99957600-99974200 Weak transcription Pancreas Pancrea
41 chr2:99957600-99989400 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
42 chr2:99957800-99960800 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
43 chr2:99957800-99962000 Weak transcription HMEC breast
44 chr2:99957800-99978200 Weak transcription Hela-S3 cervix
45 chr2:99958000-99961000 Weak transcription Ovary ovary
46 chr2:99958000-99963800 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
47 chr2:99958000-99964800 Weak transcription K562 blood
48 chr2:99958000-99965400 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
49 chr2:99958000-99969800 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
50 chr2:99958000-99970000 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin

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Last update: Aug 31, 2015