The 2.0 version of rSNPBase

Variant report

Variant rs13430662
Chromosome Location chr2:99905135-99905136
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:68 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr2:99879000-99933600 Weak transcription Brain Cingulate Gyrus brain
2 chr2:99880400-99907400 Weak transcription Right Ventricle heart
3 chr2:99889000-99906000 Weak transcription Aorta Aorta
4 chr2:99892400-99918600 Weak transcription Brain Anterior Caudate brain
5 chr2:99892400-99935000 Weak transcription Brain Angular Gyrus brain
6 chr2:99894200-99934800 Weak transcription Gastric stomach
7 chr2:99895400-99935000 Weak transcription Pancreas Pancrea
8 chr2:99895800-99914400 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
9 chr2:99895800-99921000 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
10 chr2:99895800-99933600 Weak transcription HSMM muscle
11 chr2:99895800-99933600 Weak transcription HSMMtube muscle
12 chr2:99896800-99933400 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
13 chr2:99897000-99907200 Weak transcription A549 lung
14 chr2:99897000-99918400 Weak transcription Duodenum Smooth Muscle Duodenum
15 chr2:99897000-99933600 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
16 chr2:99897200-99914600 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
17 chr2:99897200-99918400 Weak transcription Cortex derived primary cultured neurospheres brain
18 chr2:99897200-99933800 Weak transcription Fetal Intestine Small intestine
19 chr2:99897400-99933800 Weak transcription HepG2 liver
20 chr2:99897600-99918800 Weak transcription HUES6 Cell Line embryonic stem cell
21 chr2:99897800-99907400 Weak transcription Adipose Nuclei Adipose
22 chr2:99898200-99918800 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
23 chr2:99898200-99934000 Weak transcription Small Intestine intestine
24 chr2:99898400-99938600 Weak transcription ES-I3 Cell Line embryonic stem cell
25 chr2:99898600-99933800 Weak transcription Colon Smooth Muscle Colon
26 chr2:99899200-99918400 Weak transcription Spleen Spleen
27 chr2:99899400-99918600 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
28 chr2:99899400-99933800 Weak transcription Primary T helper 17 cells PMA-I stimulated --
29 chr2:99899600-99918600 Weak transcription Primary T helper cells fromperipheralblood blood
30 chr2:99899600-99933000 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
31 chr2:99899800-99935000 Weak transcription Esophagus oesophagus
32 chr2:99900000-99933600 Weak transcription Primary T helper naive cells from peripheral blood blood
33 chr2:99900400-99933800 Weak transcription Colonic Mucosa Colon
34 chr2:99901000-99918600 Weak transcription Monocytes-CD14+_RO01746 blood
35 chr2:99901200-99933400 Weak transcription Primary B cells from cord blood blood
36 chr2:99901200-99936600 Weak transcription Fetal Brain Male brain
37 chr2:99901400-99906400 Weak transcription Liver Liver
38 chr2:99901400-99914400 Weak transcription Thymus Thymus
39 chr2:99901400-99918400 Weak transcription Brain Germinal Matrix brain
40 chr2:99901400-99918800 Weak transcription Primary T helper naive cells fromperipheralblood blood
41 chr2:99901400-99922800 Weak transcription Ovary ovary
42 chr2:99901600-99907600 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
43 chr2:99901600-99907600 Weak transcription Brain Substantia Nigra brain
44 chr2:99901600-99907800 Weak transcription Fetal Brain Female brain
45 chr2:99901600-99918400 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
46 chr2:99901600-99918600 Weak transcription Primary T helper cells PMA-I stimulated --
47 chr2:99901600-99918600 Weak transcription Psoas Muscle Psoas
48 chr2:99901600-99918600 Weak transcription Rectal Mucosa Donor 29 rectum
49 chr2:99901600-99919800 Weak transcription Primary mononuclear cells fromperipheralblood Blood
50 chr2:99901600-99933400 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung

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Last update: Aug 31, 2015