Variant report

Variant	rs10192507
Chromosome Location	chr2:86035891-86035892
allele	G/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr2:86024028..86026534-chr2:86035288..86037420,2	K562	blood:

rs_ID	r²[population]
rs13422943	0.91[AMR][1000 genomes];0.91[EUR][1000 genomes]
rs13423116	0.95[AMR][1000 genomes];0.91[EUR][1000 genomes]
rs55637101	0.87[EUR][1000 genomes]
rs55746113	0.88[AMR][1000 genomes];0.97[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs55763047	0.87[EUR][1000 genomes]
rs55841727	0.92[EUR][1000 genomes]
rs56075967	0.87[EUR][1000 genomes]
rs56232523	0.91[EUR][1000 genomes]
rs56363459	0.87[EUR][1000 genomes]
rs57536133	0.86[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs6724442	0.92[EUR][1000 genomes]
rs6753123	0.92[EUR][1000 genomes]
rs72842020	0.91[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs72842049	0.92[EUR][1000 genomes]
rs72842057	0.87[EUR][1000 genomes]
rs72842058	0.87[EUR][1000 genomes]
rs73943774	0.87[EUR][1000 genomes]
rs7580976	0.82[EUR][1000 genomes]
rs7591383	0.95[AMR][1000 genomes];0.91[EUR][1000 genomes]

Chromatin state (count:29 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr2:86024400-86037400	Weak transcription	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
2	chr2:86024400-86037600	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
3	chr2:86024600-86043600	Weak transcription	Right Ventricle	heart
4	chr2:86024800-86038000	Weak transcription	Ovary	ovary
5	chr2:86025400-86037600	Weak transcription	Right Atrium	heart
6	chr2:86027000-86038000	Weak transcription	Left Ventricle	heart
7	chr2:86027200-86037600	Weak transcription	Muscle Satellite Cultured Cells	--
8	chr2:86028600-86037200	Weak transcription	Fetal Lung	lung
9	chr2:86028800-86039000	Weak transcription	Foreskin Melanocyte Primary Cells skin01	Skin
10	chr2:86029000-86040800	Weak transcription	Brain Hippocampus Middle	brain
11	chr2:86029800-86054400	Weak transcription	Spleen	Spleen
12	chr2:86030000-86037600	Weak transcription	Aorta	Aorta
13	chr2:86030600-86037600	Weak transcription	IMR90 fetal lung fibroblasts Cell Line	lung
14	chr2:86032200-86037400	Weak transcription	Fetal Heart	heart
15	chr2:86032200-86037600	Weak transcription	Skeletal Muscle Female	skeletal muscle
16	chr2:86032600-86037800	Weak transcription	HSMM	muscle
17	chr2:86032800-86038000	Weak transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
18	chr2:86033400-86037600	Weak transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
19	chr2:86034200-86037600	Weak transcription	Fetal Intestine Small	intestine
20	chr2:86034200-86037800	Weak transcription	Gastric	stomach
21	chr2:86034200-86038000	Weak transcription	Rectal Mucosa Donor 31	rectum
22	chr2:86034200-86038200	Weak transcription	Sigmoid Colon	Sigmoid Colon
23	chr2:86034400-86037000	Weak transcription	A549	lung
24	chr2:86034400-86037600	Weak transcription	Lung	lung
25	chr2:86034400-86037600	Weak transcription	Stomach Mucosa	stomach
26	chr2:86034600-86037600	Weak transcription	Fetal Intestine Large	intestine
27	chr2:86035200-86037600	Weak transcription	Pancreas	Pancrea
28	chr2:86035400-86036600	Enhancers	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
29	chr2:86035400-86038000	Weak transcription	Liver	Liver

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