Variant report

Variant	rs7591383
Chromosome Location	chr2:86039597-86039598
allele	C/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr2:85963183..85964846-chr2:86037583..86040110,2	MCF-7	breast:

Extended variants
information (count: 18 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:18)

rs_ID	r²[population]
rs10192507	0.95[AMR][1000 genomes];0.91[EUR][1000 genomes]
rs13422943	0.85[AFR][1000 genomes];0.97[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs13423116	0.85[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs55637101	0.92[EUR][1000 genomes]
rs55746113	0.83[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs55763047	0.92[EUR][1000 genomes]
rs55841727	0.96[EUR][1000 genomes]
rs56075967	0.92[EUR][1000 genomes]
rs56232523	0.95[EUR][1000 genomes]
rs56363459	0.92[EUR][1000 genomes]
rs57536133	0.88[AMR][1000 genomes];0.99[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs6724442	0.85[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs6753123	0.85[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs72842020	0.96[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs72842049	0.96[EUR][1000 genomes]
rs72842057	0.91[EUR][1000 genomes]
rs72842058	0.92[EUR][1000 genomes]
rs73943774	0.92[EUR][1000 genomes]

No data

Chromatin state (count:39 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr2:86024600-86043600	Weak transcription	Right Ventricle	heart
2	chr2:86029000-86040800	Weak transcription	Brain Hippocampus Middle	brain
3	chr2:86029800-86054400	Weak transcription	Spleen	Spleen
4	chr2:86037000-86041400	Enhancers	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
5	chr2:86037200-86041400	Enhancers	Fetal Lung	lung
6	chr2:86037400-86039600	Enhancers	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
7	chr2:86037600-86039600	Enhancers	Lung	lung
8	chr2:86037600-86039600	Enhancers	NH-A	brain
9	chr2:86037600-86039800	Enhancers	IMR90 fetal lung fibroblasts Cell Line	lung
10	chr2:86037600-86039800	Enhancers	iPS DF 19.11 Cell Line	embryonic stem cell
11	chr2:86037600-86039800	Enhancers	Muscle Satellite Cultured Cells	--
12	chr2:86037600-86039800	Enhancers	Aorta	Aorta
13	chr2:86037600-86039800	Bivalent Enhancer	Fetal Muscle Trunk	muscle
14	chr2:86037600-86039800	Enhancers	Right Atrium	heart
15	chr2:86037600-86040600	Enhancers	Skeletal Muscle Male	skeletal muscle
16	chr2:86037600-86041400	Enhancers	Breast Myoepithelial Primary Cells	Breast
17	chr2:86037600-86042600	Enhancers	Skeletal Muscle Female	skeletal muscle
18	chr2:86037800-86039600	Enhancers	HSMM	muscle
19	chr2:86038000-86039600	Enhancers	Fetal Stomach	stomach
20	chr2:86038000-86039800	Enhancers	Ovary	ovary
21	chr2:86038600-86039800	Enhancers	Liver	Liver
22	chr2:86038800-86039600	Enhancers	Stomach Smooth Muscle	stomach
23	chr2:86039000-86039600	Enhancers	Foreskin Fibroblast Primary Cells skin01	Skin
24	chr2:86039000-86039600	Enhancers	Foreskin Melanocyte Primary Cells skin01	Skin
25	chr2:86039000-86039600	Enhancers	Osteobl	bone
26	chr2:86039000-86040800	Weak transcription	NHLF	lung
27	chr2:86039000-86041000	Weak transcription	Pancreas	Pancrea
28	chr2:86039000-86041000	Weak transcription	HSMMtube	muscle
29	chr2:86039000-86041000	Weak transcription	NHDF-Ad	bronchial
30	chr2:86039000-86041200	Weak transcription	Gastric	stomach
31	chr2:86039000-86041200	Weak transcription	Rectal Mucosa Donor 31	rectum
32	chr2:86039000-86042400	Weak transcription	Left Ventricle	heart
33	chr2:86039200-86039600	Weak transcription	A549	lung
34	chr2:86039200-86039800	Enhancers	Brain Cingulate Gyrus	brain
35	chr2:86039200-86039800	Bivalent Enhancer	HepG2	liver
36	chr2:86039200-86040400	Weak transcription	Foreskin Fibroblast Primary Cells skin02	Skin
37	chr2:86039200-86041200	Weak transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
38	chr2:86039200-86041200	Weak transcription	Colon Smooth Muscle	Colon
39	chr2:86039400-86041000	Weak transcription	Adipose Nuclei	Adipose

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