Variant report

rSNPs within LD-proxies of this variant (count:20)

rs_ID	r²[population]
rs12477088	0.90[AMR][1000 genomes];0.88[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs13387688	0.84[AFR][1000 genomes]
rs1430786	0.89[ASN][1000 genomes]
rs1549783	0.84[AFR][1000 genomes]
rs17033996	0.83[ASN][1000 genomes]
rs17034031	0.84[AFR][1000 genomes]
rs2861683	0.89[AMR][1000 genomes];0.91[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs2861685	0.89[AMR][1000 genomes];0.90[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs2861691	0.87[AMR][1000 genomes];0.83[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs4316924	0.85[AFR][1000 genomes]
rs4362542	0.88[AMR][1000 genomes];0.89[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs4671187	0.80[CHB][hapmap]
rs6546319	0.89[AMR][1000 genomes];0.90[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs6732490	0.83[ASN][1000 genomes]
rs6746168	0.90[CHB][hapmap];0.95[JPT][hapmap]
rs6756226	0.82[ASN][1000 genomes]
rs6760893	0.84[ASN][1000 genomes]
rs9309401	0.84[AFR][1000 genomes]
rs9789546	0.86[ASN][1000 genomes]
rs980226	0.85[AFR][1000 genomes];0.90[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv534389	chr2:67388428-68225338	Enhancers Active TSS ZNF genes & repeats Weak transcription Flanking Active TSS Genic enhancers Transcr. at gene 5' and 3' Bivalent Enhancer Strong transcription Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	36 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:4 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr2:67864200-67867200	Enhancers	Skeletal Muscle Male	skeletal muscle
2	chr2:67864600-67866400	Enhancers	Fetal Heart	heart
3	chr2:67864800-67867000	Weak transcription	Psoas Muscle	Psoas
4	chr2:67865400-67866200	Weak transcription	Skeletal Muscle Female	skeletal muscle

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