Variant report

rSNPs within LD-proxies of this variant (count:38)

rs_ID	r²[population]
rs10196304	0.85[AFR][1000 genomes];0.90[ASN][1000 genomes]
rs10490723	0.85[ASN][1000 genomes]
rs12105010	0.82[AFR][1000 genomes]
rs12477088	0.90[ASN][1000 genomes]
rs12618268	0.82[ASN][1000 genomes]
rs12987509	0.83[ASN][1000 genomes]
rs12989021	0.83[ASN][1000 genomes]
rs12992403	0.87[ASN][1000 genomes]
rs12997331	0.81[ASN][1000 genomes]
rs13003698	0.81[ASN][1000 genomes]
rs13005138	0.82[ASN][1000 genomes]
rs13013880	0.83[ASN][1000 genomes]
rs13019532	0.83[ASN][1000 genomes]
rs13021903	0.87[ASN][1000 genomes]
rs13023342	0.81[ASN][1000 genomes]
rs13025342	0.81[ASN][1000 genomes]
rs13025376	0.84[ASN][1000 genomes]
rs13028371	0.86[ASN][1000 genomes]
rs1430786	0.81[AMR][1000 genomes];0.88[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs17033996	0.91[ASN][1000 genomes]
rs2861683	0.89[ASN][1000 genomes]
rs2861685	0.89[ASN][1000 genomes]
rs2861691	0.87[ASN][1000 genomes]
rs35002785	0.82[ASN][1000 genomes]
rs35179846	0.83[ASN][1000 genomes]
rs35820615	0.82[ASN][1000 genomes]
rs4141819	0.86[AFR][1000 genomes]
rs4362542	0.91[ASN][1000 genomes]
rs4671187	0.81[CHB][hapmap]
rs62156279	0.82[ASN][1000 genomes]
rs6546315	0.83[ASN][1000 genomes]
rs6546319	0.91[ASN][1000 genomes]
rs6731513	0.84[ASN][1000 genomes]
rs6732490	0.91[ASN][1000 genomes]
rs6746168	0.95[CHB][hapmap];0.88[CHD][hapmap];0.95[JPT][hapmap]
rs6756226	0.90[ASN][1000 genomes]
rs6760893	0.92[ASN][1000 genomes]
rs9789546	0.81[EUR][1000 genomes];0.87[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv534389	chr2:67388428-68225338	Enhancers Active TSS ZNF genes & repeats Weak transcription Flanking Active TSS Genic enhancers Transcr. at gene 5' and 3' Bivalent Enhancer Strong transcription Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	36 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:3 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr2:67864200-67864800	Enhancers	Psoas Muscle	Psoas
2	chr2:67864200-67865400	Enhancers	Skeletal Muscle Female	skeletal muscle
3	chr2:67864200-67867200	Enhancers	Skeletal Muscle Male	skeletal muscle

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