The 2.0 version of rSNPBase

Variant report

Variant rs10198531
Chromosome Location chr2:152635358-152635359
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:107 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr2:152614600-152638000 Weak transcription Pancreas Pancrea
2 chr2:152616800-152644400 Weak transcription Placenta Amnion Placenta Amnion
3 chr2:152616800-152662400 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
4 chr2:152617000-152638000 Weak transcription Esophagus oesophagus
5 chr2:152617000-152669400 Weak transcription Gastric stomach
6 chr2:152619000-152677400 Weak transcription Brain Substantia Nigra brain
7 chr2:152619800-152635800 Weak transcription Fetal Brain Female brain
8 chr2:152622200-152661800 Weak transcription Fetal Kidney kidney
9 chr2:152623000-152680000 Weak transcription Spleen Spleen
10 chr2:152623200-152638000 Weak transcription HUES64 Cell Line embryonic stem cell
11 chr2:152623400-152635800 Weak transcription Primary hematopoietic stem cells blood
12 chr2:152623400-152658800 Weak transcription Primary T regulatory cells fromperipheralblood blood
13 chr2:152623400-152659000 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
14 chr2:152623600-152659000 Weak transcription Primary T killer naive cells fromperipheralblood blood
15 chr2:152623800-152635800 Weak transcription Brain Anterior Caudate brain
16 chr2:152623800-152642000 Weak transcription Primary T helper cells fromperipheralblood blood
17 chr2:152624000-152662600 Weak transcription Primary T helper naive cells fromperipheralblood blood
18 chr2:152624200-152641400 Weak transcription Brain Angular Gyrus brain
19 chr2:152624200-152643000 Weak transcription ES-I3 Cell Line embryonic stem cell
20 chr2:152624400-152635800 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
21 chr2:152624400-152656800 Weak transcription HepG2 liver
22 chr2:152625400-152660000 Weak transcription Primary mononuclear cells fromperipheralblood Blood
23 chr2:152626800-152643600 Weak transcription Pancreatic Islets Pancreatic Islet
24 chr2:152626800-152647000 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
25 chr2:152627000-152638000 Weak transcription Primary Natural Killer cells fromperipheralblood blood
26 chr2:152627200-152641800 Weak transcription Brain Germinal Matrix brain
27 chr2:152628000-152654800 Strong transcription Monocytes-CD14+_RO01746 blood
28 chr2:152628200-152641200 Weak transcription Duodenum Smooth Muscle Duodenum
29 chr2:152628800-152635600 Weak transcription Adipose Nuclei Adipose
30 chr2:152629000-152661800 Weak transcription Rectal Smooth Muscle rectum
31 chr2:152629200-152638000 Weak transcription Fetal Lung lung
32 chr2:152629200-152641600 Weak transcription Psoas Muscle Psoas
33 chr2:152630000-152641200 Weak transcription Brain Cingulate Gyrus brain
34 chr2:152631200-152636000 Weak transcription Duodenum Mucosa Duodenum
35 chr2:152631200-152637000 Weak transcription H1 Cell Line embryonic stem cell
36 chr2:152631400-152637600 Weak transcription Rectal Mucosa Donor 31 rectum
37 chr2:152631400-152652000 Weak transcription HUES48 Cell Line embryonic stem cell
38 chr2:152631400-152667200 Weak transcription Colon Smooth Muscle Colon
39 chr2:152631600-152636400 ZNF genes & repeats hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
40 chr2:152631600-152661800 Weak transcription HMEC breast
41 chr2:152631800-152635800 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
42 chr2:152631800-152637600 Weak transcription Fetal Heart heart
43 chr2:152631800-152641400 Weak transcription Brain Inferior Temporal Lobe brain
44 chr2:152631800-152648600 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
45 chr2:152632000-152636000 Weak transcription GM12878-XiMat blood
46 chr2:152632000-152637800 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
47 chr2:152632000-152637800 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
48 chr2:152632000-152642200 Weak transcription NHDF-Ad bronchial
49 chr2:152632000-152659000 Weak transcription NHLF lung
50 chr2:152632200-152636000 Weak transcription HSMM muscle

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Last update: Aug 31, 2015