Variant report

Variant	rs10241520
Chromosome Location	chr7:119856856-119856857
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 15 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:13)

rs_ID	r²[population]
rs10237275	0.89[EUR][1000 genomes]
rs10247464	0.87[EUR][1000 genomes]
rs10250387	0.88[EUR][1000 genomes]
rs10252729	0.89[EUR][1000 genomes]
rs10278455	0.88[EUR][1000 genomes]
rs17142585	0.89[EUR][1000 genomes]
rs2107994	0.85[CEU][hapmap];0.84[EUR][1000 genomes]
rs2190183	0.89[EUR][1000 genomes]
rs60578704	0.88[EUR][1000 genomes]
rs6466739	0.84[EUR][1000 genomes]
rs6943223	0.88[EUR][1000 genomes]
rs6974349	0.89[EUR][1000 genomes]
rs7782622	0.88[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv831113	chr7:119683515-119886277	Weak transcription Enhancers Flanking Active TSS ZNF genes & repeats Active TSS	TF binding region CpG island Chromatin interactive region lncRNA	5 gene(s)	inside rSNPs	diseases
2	nsv608326	chr7:119828331-119995890	Enhancers Bivalent/Poised TSS Flanking Bivalent TSS/Enh Active TSS ZNF genes & repeats Weak transcription Bivalent Enhancer Flanking Active TSS Transcr. at gene 5' and 3' Strong transcription	TF binding region CpG island Chromatin interactive region lncRNA	4 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:0 , 50 per page) page:

No data

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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