The 2.0 version of rSNPBase

Variant report

Variant rs10245581
Chromosome Location chr7:99485000-99485001
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:37 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr7:99458200-99489600 Weak transcription Pancreas Pancrea
2 chr7:99468400-99487200 Weak transcription Brain Cingulate Gyrus brain
3 chr7:99470000-99489600 Weak transcription Gastric stomach
4 chr7:99470400-99486800 Weak transcription Primary T cells from cord blood blood
5 chr7:99470400-99487000 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
6 chr7:99471400-99487000 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
7 chr7:99472400-99487200 Weak transcription Brain Anterior Caudate brain
8 chr7:99472400-99487400 Weak transcription Aorta Aorta
9 chr7:99472600-99487000 Weak transcription Duodenum Smooth Muscle Duodenum
10 chr7:99472600-99487200 Weak transcription Rectal Mucosa Donor 29 rectum
11 chr7:99472600-99487600 Weak transcription Lung lung
12 chr7:99472600-99488800 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
13 chr7:99473000-99487200 Weak transcription Brain Substantia Nigra brain
14 chr7:99473200-99487200 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
15 chr7:99474600-99487000 Weak transcription Adipose Nuclei Adipose
16 chr7:99474800-99487000 Weak transcription Primary hematopoietic stem cells short term culture blood
17 chr7:99476000-99487000 Weak transcription Primary T regulatory cells fromperipheralblood blood
18 chr7:99478200-99487000 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
19 chr7:99479200-99488800 Weak transcription Thymus Thymus
20 chr7:99479800-99499200 Weak transcription Small Intestine intestine
21 chr7:99480400-99487800 Weak transcription Primary T killer naive cells fromperipheralblood blood
22 chr7:99480800-99487200 Weak transcription Primary T killer memory cells from peripheral blood blood
23 chr7:99482600-99487400 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
24 chr7:99483000-99487200 Weak transcription Primary T cells fromperipheralblood blood
25 chr7:99484000-99487000 Weak transcription Primary T helper naive cells fromperipheralblood blood
26 chr7:99484000-99487200 Weak transcription Primary Natural Killer cells fromperipheralblood blood
27 chr7:99484200-99487000 Weak transcription Brain Inferior Temporal Lobe brain
28 chr7:99484600-99487200 Weak transcription Brain Hippocampus Middle brain
29 chr7:99484600-99487200 Weak transcription Spleen Spleen
30 chr7:99484800-99487000 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
31 chr7:99484800-99487000 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
32 chr7:99484800-99487000 Weak transcription Placenta Placenta
33 chr7:99484800-99487200 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
34 chr7:99484800-99487200 Weak transcription Fetal Muscle Trunk muscle
35 chr7:99485000-99486800 Weak transcription Primary T helper cells fromperipheralblood blood
36 chr7:99485000-99487000 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
37 chr7:99485000-99487400 Weak transcription Brain Angular Gyrus brain

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Last update: Aug 31, 2015