Variant report

rSNPs within LD-proxies of this variant (count:20)

rs_ID	r²[population]
rs10216302	0.85[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs10230894	0.85[AMR][1000 genomes];0.91[EUR][1000 genomes]
rs10238729	0.98[AMR][1000 genomes];0.95[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs10246378	0.83[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs10254052	0.98[AMR][1000 genomes];0.95[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs10458286	0.89[EUR][1000 genomes]
rs10458287	0.81[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs17157125	0.80[EUR][1000 genomes]
rs17157128	0.98[AMR][1000 genomes];0.89[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs17157144	0.98[AMR][1000 genomes];0.93[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs28376312	0.86[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs28422835	0.86[AMR][1000 genomes];0.86[EUR][1000 genomes]
rs3857817	0.88[EUR][1000 genomes]
rs4125502	0.98[AMR][1000 genomes];0.93[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs55917011	0.96[AMR][1000 genomes];0.95[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs58130032	0.86[EUR][1000 genomes]
rs67193600	0.85[AMR][1000 genomes];0.91[EUR][1000 genomes]
rs73183735	0.98[AMR][1000 genomes];0.93[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs73183737	0.98[AMR][1000 genomes];0.93[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs73183741	0.82[AMR][1000 genomes];1.00[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv1843940	chr7:103421702-103590285	Weak transcription Enhancers Strong transcription Flanking Active TSS Genic enhancers Active TSS ZNF genes & repeats	Chromatin interactive region	2 gene(s)	inside rSNPs	diseases
2	esv3418719	chr7:103544304-103544835	Weak transcription	Chromatin interactive region	n/a	inside rSNPs	diseases

No data

Chromatin state (count:2 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr7:103531200-103546000	Weak transcription	HepG2	liver
2	chr7:103544000-103546600	Weak transcription	K562	blood

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