Variant report

rSNPs within LD-proxies of this variant (count:30)

rs_ID	r²[population]
rs10228341	1.00[CHB][hapmap];0.83[CHD][hapmap];0.89[JPT][hapmap];0.90[ASN][1000 genomes]
rs10441038	1.00[ASW][hapmap]
rs10441039	1.00[CHB][hapmap];0.90[JPT][hapmap];0.90[ASN][1000 genomes]
rs11975390	1.00[CEU][hapmap]
rs12056184	1.00[CEU][hapmap];0.81[CHB][hapmap];1.00[JPT][hapmap];1.00[EUR][1000 genomes]
rs12056282	0.81[CHB][hapmap];1.00[JPT][hapmap];0.81[ASN][1000 genomes]
rs12113191	1.00[CHB][hapmap];0.83[CHD][hapmap];0.90[JPT][hapmap];0.90[ASN][1000 genomes]
rs13221164	0.87[ASW][hapmap]
rs13230142	1.00[CHB][hapmap];0.87[CHD][hapmap];1.00[JPT][hapmap];0.90[ASN][1000 genomes]
rs13234562	0.84[ASN][1000 genomes]
rs13241140	0.87[ASW][hapmap]
rs13347372	1.00[AMR][1000 genomes]
rs17140086	1.00[CEU][hapmap];0.81[CHB][hapmap];1.00[JPT][hapmap]
rs17140133	1.00[CHB][hapmap];0.94[CHD][hapmap];1.00[JPT][hapmap];0.87[ASN][1000 genomes]
rs17140138	1.00[CHB][hapmap];1.00[JPT][hapmap];0.87[ASN][1000 genomes]
rs17140237	1.00[CEU][hapmap]
rs2389995	1.00[CEU][hapmap]
rs34707237	0.90[ASN][1000 genomes]
rs35024729	0.85[ASN][1000 genomes]
rs35936891	0.90[ASN][1000 genomes]
rs3852253	1.00[JPT][hapmap]
rs3852255	0.81[CHB][hapmap];0.82[JPT][hapmap]
rs55885016	0.92[ASN][1000 genomes]
rs55930836	0.90[ASN][1000 genomes]
rs59593404	1.00[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs59618106	0.85[ASN][1000 genomes]
rs59868523	1.00[EUR][1000 genomes]
rs6978417	0.98[AFR][1000 genomes];1.00[AMR][1000 genomes];0.88[ASN][1000 genomes]
rs73312680	0.80[ASN][1000 genomes]
rs7789261	0.82[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:4 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv498112	chr7:18677922-18991946	Weak transcription Enhancers Active TSS Flanking Active TSS Strong transcription Genic enhancers ZNF genes & repeats Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	5 gene(s)	inside rSNPs	diseases
2	nsv887813	chr7:18720135-18995552	Enhancers Weak transcription Active TSS Flanking Active TSS Bivalent Enhancer ZNF genes & repeats Strong transcription Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	4 gene(s)	inside rSNPs	diseases
3	nsv523497	chr7:18896011-18959381	Weak transcription Flanking Active TSS Genic enhancers Enhancers ZNF genes & repeats Active TSS	TF binding region CpG island lncRNA	1 gene(s)	inside rSNPs	diseases
4	esv2756248	chr7:18911960-18977760	Enhancers Weak transcription Flanking Active TSS Active TSS Genic enhancers ZNF genes & repeats	TF binding region CpG island lncRNA	1 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:3 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr7:18903000-18940000	Weak transcription	Aorta	Aorta
2	chr7:18906200-18929200	Weak transcription	Left Ventricle	heart
3	chr7:18908000-18913800	Weak transcription	NHDF-Ad	bronchial

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