Variant report

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr7:18882137..18885083-chr7:18886312..18888686,2	K562	blood:

rSNPs within LD-proxies of this variant (count:22)

rs_ID	r²[population]
rs10228341	0.81[CHB][hapmap];0.89[JPT][hapmap]
rs10247184	1.00[CEU][hapmap];0.81[CHB][hapmap];1.00[JPT][hapmap];1.00[EUR][1000 genomes]
rs10441039	0.81[CHB][hapmap];0.90[JPT][hapmap]
rs11975390	1.00[CEU][hapmap]
rs12056282	1.00[CHB][hapmap];1.00[JPT][hapmap];0.91[ASN][1000 genomes]
rs12113191	0.81[CHB][hapmap];0.90[JPT][hapmap]
rs13230142	1.00[JPT][hapmap];0.87[ASN][1000 genomes]
rs13234562	0.94[ASN][1000 genomes]
rs17140086	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.85[ASN][1000 genomes]
rs17140133	0.81[CHB][hapmap];1.00[JPT][hapmap];0.81[ASN][1000 genomes]
rs17140138	0.82[CHB][hapmap];1.00[JPT][hapmap];0.81[ASN][1000 genomes]
rs17140237	1.00[CEU][hapmap]
rs2389995	1.00[CEU][hapmap]
rs35936891	0.87[ASN][1000 genomes]
rs3852253	0.91[CHB][hapmap];1.00[JPT][hapmap]
rs3852254	0.81[ASN][1000 genomes]
rs3852255	1.00[CHB][hapmap];0.82[JPT][hapmap];0.81[ASN][1000 genomes]
rs55885016	0.85[ASN][1000 genomes]
rs55930836	0.87[ASN][1000 genomes]
rs59593404	1.00[EUR][1000 genomes]
rs59868523	1.00[EUR][1000 genomes]
rs73312680	0.86[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:3 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv498112	chr7:18677922-18991946	Weak transcription Enhancers Active TSS Flanking Active TSS Strong transcription Genic enhancers ZNF genes & repeats Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	5 gene(s)	inside rSNPs	diseases
2	nsv887813	chr7:18720135-18995552	Enhancers Weak transcription Active TSS Flanking Active TSS Bivalent Enhancer ZNF genes & repeats Strong transcription Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	4 gene(s)	inside rSNPs	diseases
3	nsv887814	chr7:18751998-18886177	Weak transcription Enhancers Flanking Active TSS Active TSS ZNF genes & repeats Strong transcription Bivalent Enhancer Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	2 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:3 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr7:18866800-18885200	Weak transcription	Primary B cells from cord blood	blood
2	chr7:18868800-18887400	Weak transcription	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
3	chr7:18875600-18888000	Weak transcription	Aorta	Aorta

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