The 2.0 version of rSNPBase

Variant report

Variant rs10264289
Chromosome Location chr7:116527863-116527864
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:117 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr7:116503800-116554400 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
2 chr7:116504400-116528800 Weak transcription H1 Cell Line embryonic stem cell
3 chr7:116504400-116533000 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
4 chr7:116504600-116540800 Weak transcription Fetal Kidney kidney
5 chr7:116505000-116533600 Weak transcription Cortex derived primary cultured neurospheres brain
6 chr7:116505000-116537400 Weak transcription Brain Germinal Matrix brain
7 chr7:116506000-116529200 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
8 chr7:116506000-116554600 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
9 chr7:116507600-116528000 Weak transcription HUES64 Cell Line embryonic stem cell
10 chr7:116511200-116528800 Weak transcription iPS-20b Cell Line embryonic stem cell
11 chr7:116511400-116528000 Weak transcription HUES48 Cell Line embryonic stem cell
12 chr7:116511400-116554600 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
13 chr7:116512000-116545400 Weak transcription NHLF lung
14 chr7:116512200-116529400 Weak transcription Osteobl bone
15 chr7:116513200-116528400 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
16 chr7:116513600-116528600 Weak transcription Muscle Satellite Cultured Cells --
17 chr7:116514200-116528200 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
18 chr7:116514400-116528000 Weak transcription HSMM muscle
19 chr7:116514400-116530600 Weak transcription HMEC breast
20 chr7:116514400-116531600 Weak transcription HUES6 Cell Line embryonic stem cell
21 chr7:116514600-116537800 Weak transcription NHEK skin
22 chr7:116515400-116559200 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
23 chr7:116516800-116551200 Weak transcription Brain Angular Gyrus brain
24 chr7:116517000-116528000 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
25 chr7:116517000-116529200 Weak transcription NH-A brain
26 chr7:116517200-116528000 Weak transcription Primary neutrophils fromperipheralblood blood
27 chr7:116517200-116528200 Weak transcription Primary Natural Killer cells fromperipheralblood blood
28 chr7:116517200-116531000 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
29 chr7:116517200-116531000 Weak transcription Hela-S3 cervix
30 chr7:116517200-116533000 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
31 chr7:116517200-116538000 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
32 chr7:116517200-116554600 Weak transcription Esophagus oesophagus
33 chr7:116517600-116528200 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
34 chr7:116517600-116529000 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
35 chr7:116517600-116556600 Weak transcription Psoas Muscle Psoas
36 chr7:116517800-116528200 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
37 chr7:116517800-116532200 Weak transcription Fetal Lung lung
38 chr7:116518000-116528800 Weak transcription Primary T cells from cord blood blood
39 chr7:116518800-116530000 Weak transcription Duodenum Smooth Muscle Duodenum
40 chr7:116520000-116532600 Weak transcription Brain Hippocampus Middle brain
41 chr7:116520000-116551200 Weak transcription Brain Inferior Temporal Lobe brain
42 chr7:116520200-116538000 Weak transcription Stomach Smooth Muscle stomach
43 chr7:116520200-116541000 Weak transcription Brain Cingulate Gyrus brain
44 chr7:116521200-116528400 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
45 chr7:116522400-116528600 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
46 chr7:116522800-116534800 Strong transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
47 chr7:116523800-116528600 Weak transcription Rectal Smooth Muscle rectum
48 chr7:116524400-116528200 Weak transcription HUVEC blood vessel
49 chr7:116524600-116542200 Strong transcription Monocytes-CD14+_RO01746 blood
50 chr7:116524600-116543800 Weak transcription ES-WA7 Cell Line embryonic stem cell

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Last update: Aug 31, 2015