The 2.0 version of rSNPBase

Variant report

Variant rs10273657
Chromosome Location chr7:50503550-50503551
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:43 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr7:50486200-50513200 Weak transcription Primary T killer naive cells fromperipheralblood blood
2 chr7:50493400-50505800 Weak transcription Thymus Thymus
3 chr7:50495200-50505800 Weak transcription Fetal Intestine Large intestine
4 chr7:50495200-50513000 Weak transcription Duodenum Mucosa Duodenum
5 chr7:50495200-50517200 Weak transcription Stomach Mucosa stomach
6 chr7:50495600-50513800 Weak transcription HepG2 liver
7 chr7:50496000-50513000 Weak transcription Gastric stomach
8 chr7:50496200-50517600 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
9 chr7:50496800-50505800 Weak transcription GM12878-XiMat blood
10 chr7:50498000-50506800 Weak transcription Sigmoid Colon Sigmoid Colon
11 chr7:50499400-50506000 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
12 chr7:50499400-50513000 Weak transcription Psoas Muscle Psoas
13 chr7:50499600-50505400 Weak transcription Fetal Lung lung
14 chr7:50499800-50506400 Weak transcription Primary B cells from peripheral blood blood
15 chr7:50500000-50505600 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
16 chr7:50500000-50513400 Weak transcription Cortex derived primary cultured neurospheres brain
17 chr7:50500400-50505600 Weak transcription Primary hematopoietic stem cells blood
18 chr7:50500600-50513000 Weak transcription HUES48 Cell Line embryonic stem cell
19 chr7:50501000-50517400 Weak transcription Esophagus oesophagus
20 chr7:50502000-50505800 Weak transcription Fetal Muscle Trunk muscle
21 chr7:50502200-50504600 Weak transcription Dnd41 blood
22 chr7:50502200-50513600 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
23 chr7:50502400-50517200 Weak transcription Small Intestine intestine
24 chr7:50502600-50503600 Enhancers Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
25 chr7:50502600-50505000 Enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
26 chr7:50502800-50504600 Weak transcription Primary T cells from cord blood blood
27 chr7:50502800-50504600 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
28 chr7:50502800-50505000 Enhancers Muscle Satellite Cultured Cells --
29 chr7:50503000-50503800 Enhancers K562 blood
30 chr7:50503000-50504600 Weak transcription Fetal Brain Female brain
31 chr7:50503000-50504800 Weak transcription Primary hematopoietic stem cells short term culture blood
32 chr7:50503000-50504800 Weak transcription Fetal Intestine Small intestine
33 chr7:50503000-50513000 Weak transcription Spleen Spleen
34 chr7:50503200-50504800 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
35 chr7:50503200-50506000 Weak transcription Primary B cells from cord blood blood
36 chr7:50503400-50503800 Enhancers Foreskin Fibroblast Primary Cells skin01 Skin
37 chr7:50503400-50503800 ZNF genes & repeats Fetal Stomach stomach
38 chr7:50503400-50503800 Enhancers Ovary ovary
39 chr7:50503400-50504800 Enhancers Primary monocytes fromperipheralblood blood
40 chr7:50503400-50505600 Weak transcription Breast Myoepithelial Primary Cells Breast
41 chr7:50503400-50505600 Weak transcription Skeletal Muscle Male skeletal muscle
42 chr7:50503400-50505800 Weak transcription Fetal Muscle Leg muscle
43 chr7:50503400-50507400 Weak transcription Stomach Smooth Muscle stomach

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Last update: Aug 31, 2015