Variant report

Variant	rs10277509
Chromosome Location	chr7:66658574-66658575
allele	C/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr7:66657820..66660105-chr7:66767390..66769267,2	K562	blood:

Variant related genes	Relation type
ENSG00000106610	Chromatin interaction
ENSG00000067601	Chromatin interaction

Extended variants
information (count: 274 )
Associated
traits (count: 6 )

rSNPs within LD-proxies of this variant (count:267)

rs_ID	r²[population]
rs10081276	0.85[AFR][1000 genomes];0.89[AMR][1000 genomes];0.93[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs10081302	0.94[AFR][1000 genomes];0.91[AMR][1000 genomes];0.92[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs10081331	0.89[AFR][1000 genomes];0.89[AMR][1000 genomes];0.93[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs10081333	0.89[AFR][1000 genomes];0.88[AMR][1000 genomes];0.93[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs10081344	0.85[AFR][1000 genomes];0.88[AMR][1000 genomes];0.93[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs10081381	0.86[AFR][1000 genomes];0.84[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs10155890	0.81[EUR][1000 genomes]
rs10155918	0.85[EUR][1000 genomes]
rs10155972	0.84[EUR][1000 genomes]
rs10155983	0.83[EUR][1000 genomes]
rs10156209	0.82[EUR][1000 genomes]
rs10230059	0.80[AMR][1000 genomes];0.90[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs10232876	0.91[AMR][1000 genomes];0.95[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs10233388	0.90[AMR][1000 genomes];0.94[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs10233507	0.91[AMR][1000 genomes];0.95[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs10235586	0.83[AFR][1000 genomes];0.82[ASN][1000 genomes]
rs10235588	0.85[EUR][1000 genomes]
rs10242431	0.84[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs10243217	0.82[EUR][1000 genomes]
rs10243421	0.91[AFR][1000 genomes];0.89[AMR][1000 genomes];0.92[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs10246623	0.84[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs10247272	0.90[AMR][1000 genomes];0.96[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs10248812	0.84[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs10250113	0.82[EUR][1000 genomes]
rs10250487	0.85[EUR][1000 genomes]
rs10251763	0.85[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs10252143	0.85[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs10253339	0.80[EUR][1000 genomes]
rs10254788	0.91[AFR][1000 genomes];0.89[AMR][1000 genomes];0.92[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs10256139	0.85[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs10257403	0.83[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs10257949	0.83[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs10258678	0.90[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs10261694	0.82[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs10262065	0.83[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs10262150	0.86[EUR][1000 genomes]
rs10267300	0.84[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs10270292	0.85[EUR][1000 genomes]
rs10272347	0.87[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs10272424	0.87[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs10272591	0.87[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs10273692	0.88[AMR][1000 genomes];0.95[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs10280699	0.81[EUR][1000 genomes]
rs1045053	0.81[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs1045064	0.85[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs1045174	0.84[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs10950062	0.88[AMR][1000 genomes];0.96[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs10950063	0.93[ASN][1000 genomes]
rs10950064	0.88[AMR][1000 genomes];0.96[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs11760347	0.89[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs11761100	0.89[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs11761577	0.83[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs11764349	0.84[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs11764376	0.88[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs11766470	0.85[ASN][1000 genomes]
rs11767172	0.85[ASN][1000 genomes]
rs11768675	0.85[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs11771408	0.87[ASN][1000 genomes]
rs11772455	0.89[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs11773274	0.90[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs11773730	0.90[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs11976638	0.90[AMR][1000 genomes];0.96[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs12154252	0.84[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs12154257	0.88[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs12154409	0.81[EUR][1000 genomes]
rs12154419	0.82[EUR][1000 genomes]
rs12154688	0.90[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs12154886	0.85[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs12155044	0.83[EUR][1000 genomes]
rs12155051	0.82[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs12155261	0.85[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs12155330	0.88[AMR][1000 genomes];0.96[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs13228667	0.82[ASN][1000 genomes]
rs13228872	0.80[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs13236735	0.82[EUR][1000 genomes]
rs13236943	0.82[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs13239980	0.85[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs13244997	0.90[AFR][1000 genomes];0.91[AMR][1000 genomes];0.93[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs1581502	0.90[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs1608581	0.81[EUR][1000 genomes]
rs1608582	0.80[EUR][1000 genomes]
rs17139656	0.90[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs17726	0.84[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs1815098	0.81[EUR][1000 genomes]
rs1815101	0.90[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs2019826	0.90[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs2177496	0.85[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs2421393	0.83[AMR][1000 genomes];0.91[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs2421398	0.87[AMR][1000 genomes];0.95[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs2421404	0.94[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs2421405	0.81[AMR][1000 genomes];0.93[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs2421419	0.82[EUR][1000 genomes]
rs2421425	0.88[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs2690170	0.82[EUR][1000 genomes]
rs28366417	0.82[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs28420076	0.85[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs2844157	0.81[ASN][1000 genomes]
rs28464901	0.86[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs28497071	0.80[AMR][1000 genomes];0.90[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs28502004	0.86[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs28534521	0.82[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs28556313	0.80[AMR][1000 genomes];0.90[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs28621376	0.83[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs28651697	0.80[EUR][1000 genomes]
rs28715521	0.81[EUR][1000 genomes]
rs28749249	0.87[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs28750410	0.87[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs28759371	0.82[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs28764821	0.81[EUR][1000 genomes]
rs28767482	0.87[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs28806258	0.89[AFR][1000 genomes];0.89[AMR][1000 genomes];0.93[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs28808071	0.85[AFR][1000 genomes];0.89[AMR][1000 genomes];0.93[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs28860910	0.89[AFR][1000 genomes];0.91[AMR][1000 genomes];0.93[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs2901424	0.86[AMR][1000 genomes];0.92[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs2949096	0.84[EUR][1000 genomes]
rs2949097	0.85[ASN][1000 genomes]
rs2949109	0.89[AFR][1000 genomes];0.89[AMR][1000 genomes];0.91[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs3107871	0.84[EUR][1000 genomes]
rs3107873	0.89[EUR][1000 genomes]
rs34145691	0.87[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs34145957	0.85[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs34146912	0.88[AFR][1000 genomes];0.87[AMR][1000 genomes];0.90[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs34176733	0.88[AFR][1000 genomes];0.89[AMR][1000 genomes];0.93[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs34237838	0.85[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs34267978	0.86[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs34344363	0.84[EUR][1000 genomes]
rs34463275	0.91[AMR][1000 genomes];0.96[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs34471265	0.85[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs34566330	0.90[AMR][1000 genomes];0.93[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs34567129	0.85[AFR][1000 genomes];0.95[AMR][1000 genomes];0.95[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs34574768	0.84[AMR][1000 genomes];0.83[EUR][1000 genomes]
rs34654147	0.87[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs34773993	0.82[EUR][1000 genomes]
rs35048638	0.82[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs35064061	0.88[AMR][1000 genomes];0.96[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs35120837	0.90[AFR][1000 genomes];0.91[AMR][1000 genomes];0.93[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs35290283	0.90[AMR][1000 genomes];0.90[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs35325827	0.85[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs35336066	0.85[AFR][1000 genomes];0.95[AMR][1000 genomes];0.96[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs35387955	0.88[AMR][1000 genomes];0.96[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs35399585	0.80[AMR][1000 genomes];0.90[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs35521959	0.90[AMR][1000 genomes];0.90[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs35599428	0.90[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs35649461	0.80[AMR][1000 genomes];0.90[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs35669114	0.80[AMR][1000 genomes];0.90[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs35723315	0.85[AMR][1000 genomes];0.87[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs35918453	0.85[AFR][1000 genomes];0.88[AMR][1000 genomes];0.93[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs35970624	0.88[AMR][1000 genomes];0.96[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs35982871	0.82[AFR][1000 genomes];0.88[AMR][1000 genomes];0.87[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs36108108	0.81[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs3897072	0.80[AMR][1000 genomes];0.90[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs3962076	0.85[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs3980767	0.87[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs3980775	0.83[AMR][1000 genomes];0.93[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs3980776	0.87[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs3980778	0.86[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs3980790	0.86[AMR][1000 genomes];0.93[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs4101640	0.87[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs4103731	0.89[AFR][1000 genomes];0.88[AMR][1000 genomes];0.91[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs4145350	0.87[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs4295533	0.87[EUR][1000 genomes]
rs4383874	0.90[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs4433024	0.82[AMR][1000 genomes];0.93[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs4486076	0.90[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs4496851	0.90[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs4504527	0.90[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs4524666	0.90[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs4535609	0.90[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs4551224	0.85[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs4552791	0.87[EUR][1000 genomes]
rs4618581	0.83[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs4621684	0.83[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs4636084	0.86[EUR][1000 genomes]
rs4717353	0.82[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs4717354	0.90[AMR][1000 genomes];0.95[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs4718463	0.82[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs4718464	0.84[EUR][1000 genomes]
rs4718469	0.82[EUR][1000 genomes]
rs4718470	0.86[EUR][1000 genomes]
rs4718471	0.85[EUR][1000 genomes]
rs4718475	0.89[AFR][1000 genomes];0.89[AMR][1000 genomes];0.93[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs4718477	0.89[AFR][1000 genomes];0.91[AMR][1000 genomes];0.93[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs4718478	0.86[AFR][1000 genomes];0.84[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs4718486	0.85[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs4718492	0.85[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs4718493	0.85[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs4718500	0.84[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs4718501	0.82[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs55673383	0.82[ASN][1000 genomes]
rs55756354	0.87[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs55921608	0.84[AMR][1000 genomes];0.89[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs56001319	0.93[AFR][1000 genomes];0.94[AMR][1000 genomes];0.93[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs56167042	0.85[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs56397344	0.84[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs61061833	0.88[AFR][1000 genomes];0.91[AMR][1000 genomes];0.92[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs61404757	0.86[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs6460333	0.80[AMR][1000 genomes];0.90[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs66806481	0.80[AMR][1000 genomes];0.90[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs66870123	0.85[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs66954241	0.80[AMR][1000 genomes];0.90[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs67650940	0.90[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs67855845	0.87[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs67890875	0.89[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs67902540	0.85[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs6942913	0.90[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs6943439	0.90[EUR][1000 genomes]
rs6944637	0.88[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs6944968	0.88[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs6947110	0.84[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs6947488	0.90[AMR][1000 genomes];0.96[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs6947514	0.85[EUR][1000 genomes]
rs6948588	0.85[AFR][1000 genomes];0.81[AMR][1000 genomes];0.86[EUR][1000 genomes]
rs6948757	0.85[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs6948793	0.82[AMR][1000 genomes];0.90[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs6949429	0.85[AFR][1000 genomes];0.88[AMR][1000 genomes];0.93[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs6951468	0.80[AMR][1000 genomes];0.90[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs6952206	0.82[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs6954515	0.89[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs6954642	0.90[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs6961084	0.80[AMR][1000 genomes];0.90[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs6962901	0.85[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs6963793	0.90[AMR][1000 genomes];0.95[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs6964179	0.80[AFR][1000 genomes];0.85[AMR][1000 genomes];0.91[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs6967217	0.82[EUR][1000 genomes]
rs6967381	0.89[AFR][1000 genomes];0.89[AMR][1000 genomes];0.93[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs6967876	0.89[AFR][1000 genomes];0.89[AMR][1000 genomes];0.93[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs6969270	0.85[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs6979001	0.83[AMR][1000 genomes];0.88[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs6979706	0.85[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs71535637	0.82[EUR][1000 genomes]
rs71535638	0.85[EUR][1000 genomes]
rs71563180	0.81[EUR][1000 genomes]
rs71563196	0.82[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs73135118	0.81[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs73140602	0.87[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs73142604	0.87[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs73142680	0.80[AMR][1000 genomes];0.90[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs73144526	0.89[ASN][1000 genomes]
rs73377106	0.86[EUR][1000 genomes]
rs7357171	0.82[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs7778900	0.82[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs7779069	0.90[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs7780700	0.85[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs7781804	0.85[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs7791642	0.87[ASN][1000 genomes]
rs7792907	0.90[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs7795390	0.85[ASN][1000 genomes]
rs7795976	0.84[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs7809415	0.84[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs7811233	0.88[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs9654771	0.87[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs9654851	0.81[EUR][1000 genomes]
rs9654853	0.87[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs9654854	0.87[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs9654859	0.84[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs9690083	0.86[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs9691404	0.83[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs9692279	0.84[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs9769387	0.90[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs9886204	0.92[AFR][1000 genomes];0.89[AMR][1000 genomes];0.93[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs9886206	0.91[AFR][1000 genomes];0.89[AMR][1000 genomes];0.92[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs9886263	0.90[AFR][1000 genomes];0.89[AMR][1000 genomes];0.93[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs9886290	0.91[AFR][1000 genomes];0.89[AMR][1000 genomes];0.92[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs9886306	0.85[AFR][1000 genomes];0.87[AMR][1000 genomes];0.92[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs9886326	0.94[AFR][1000 genomes];0.91[AMR][1000 genomes];0.92[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs9986784	0.86[AFR][1000 genomes];0.87[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs9986995	0.85[AFR][1000 genomes];0.89[AMR][1000 genomes];0.93[EUR][1000 genomes];0.89[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:7 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv2758118	chr7:66401430-66859253	Weak transcription Active TSS Enhancers Flanking Active TSS Strong transcription ZNF genes & repeats Genic enhancers Bivalent/Poised TSS Bivalent Enhancer Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	47 gene(s)	inside rSNPs	diseases
2	esv2759535	chr7:66401430-66859253	Weak transcription Enhancers Strong transcription ZNF genes & repeats Transcr. at gene 5' and 3' Active TSS Bivalent/Poised TSS Genic enhancers Flanking Active TSS Bivalent Enhancer Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	47 gene(s)	inside rSNPs	diseases
3	nsv888330	chr7:66502171-66877880	Weak transcription Enhancers Strong transcription ZNF genes & repeats Flanking Active TSS Active TSS Genic enhancers Bivalent Enhancer Transcr. at gene 5' and 3' Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA	39 gene(s)	inside rSNPs	diseases
4	nsv831019	chr7:66516808-66720485	Weak transcription ZNF genes & repeats Strong transcription Enhancers Flanking Active TSS Active TSS Transcr. at gene 5' and 3' Genic enhancers Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region miRNA	9 gene(s)	inside rSNPs	diseases
5	esv2422035	chr7:66621964-66676630	Enhancers Strong transcription Weak transcription ZNF genes & repeats Flanking Active TSS Genic enhancers Active TSS Flanking Bivalent TSS/Enh	Chromatin interactive region	2 gene(s)	inside rSNPs	diseases
6	nsv1032237	chr7:66644492-66785029	Weak transcription Strong transcription Active TSS Enhancers Flanking Active TSS ZNF genes & repeats Genic enhancers Bivalent/Poised TSS Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	17 gene(s)	inside rSNPs	diseases
7	nsv970518	chr7:66647675-66742783	Strong transcription Weak transcription Enhancers Genic enhancers ZNF genes & repeats Active TSS Flanking Active TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	3 gene(s)	inside rSNPs	diseases

mRNA abundance (count:6)

SNP	Gene	Cis/trans	Tissue	Source
rs10277509	TYW1	cis	Muscle Skeletal	GTEx
rs10277509	TYW1	Cis_1M	lymphoblastoid	RTeQTL
rs10277509	TYW1	cis	Heart Left Ventricle	GTEx
rs10277509	TYW1	cis	Nerve Tibial	GTEx
rs10277509	GS1-124K5.4	cis	Nerve Tibial	GTEx
rs10277509	TYW1	cis	Esophagus Mucosa	GTEx

Chromatin state (count:79 , 50 per page) page: 1 2

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr7:66621600-66672000	Weak transcription	Fetal Intestine Large	intestine
2	chr7:66628600-66684600	Weak transcription	Primary T regulatory cells fromperipheralblood	blood
3	chr7:66640600-66677200	Weak transcription	Rectal Mucosa Donor 31	rectum
4	chr7:66643000-66660000	Weak transcription	Dnd41	blood
5	chr7:66644400-66659400	Weak transcription	Breast Myoepithelial Primary Cells	Breast
6	chr7:66644400-66683000	Weak transcription	Foreskin Keratinocyte Primary Cells skin02	Skin
7	chr7:66644600-66659400	Weak transcription	Fetal Intestine Small	intestine
8	chr7:66644800-66660200	Weak transcription	Adipose Nuclei	Adipose
9	chr7:66645000-66660000	Weak transcription	Primary mononuclear cells fromperipheralblood	Blood
10	chr7:66645800-66660000	Weak transcription	Primary T helper naive cells fromperipheralblood	blood
11	chr7:66647000-66677400	Weak transcription	Stomach Smooth Muscle	stomach
12	chr7:66647600-66661400	Weak transcription	Rectal Mucosa Donor 29	rectum
13	chr7:66647800-66659800	Weak transcription	Monocytes-CD14+_RO01746	blood
14	chr7:66647800-66660000	Weak transcription	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
15	chr7:66648200-66679800	Weak transcription	Primary T helper memory cells from peripheral blood 1	blood
16	chr7:66648800-66667200	Weak transcription	Sigmoid Colon	Sigmoid Colon
17	chr7:66649200-66677200	Weak transcription	Right Ventricle	heart
18	chr7:66649200-66679200	Weak transcription	NHEK	skin
19	chr7:66650000-66660000	Weak transcription	Primary B cells from peripheral blood	blood
20	chr7:66650600-66661800	Weak transcription	Fetal Stomach	stomach
21	chr7:66651200-66675400	Weak transcription	Duodenum Mucosa	Duodenum
22	chr7:66652800-66675600	Weak transcription	Aorta	Aorta
23	chr7:66654400-66677400	Weak transcription	Esophagus	oesophagus
24	chr7:66654400-66681600	Weak transcription	Spleen	Spleen
25	chr7:66654600-66660200	Weak transcription	Primary T cells from cord blood	blood
26	chr7:66654600-66660200	Weak transcription	Primary hematopoietic stem cells short term culture	blood
27	chr7:66654600-66660200	Weak transcription	Fetal Kidney	kidney
28	chr7:66654600-66661400	Weak transcription	H9 Derived Neuron Cultured Cells	ES cell derived
29	chr7:66654600-66678200	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
30	chr7:66654600-66683400	Weak transcription	Pancreas	Pancrea
31	chr7:66654600-66684600	Weak transcription	Primary T helper cells PMA-I stimulated	--
32	chr7:66654600-66704600	Weak transcription	Gastric	stomach
33	chr7:66654600-66709600	Weak transcription	Lung	lung
34	chr7:66655000-66675400	Weak transcription	Thymus	Thymus
35	chr7:66655400-66659800	Weak transcription	Primary B cells from cord blood	blood
36	chr7:66655400-66660200	Weak transcription	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
37	chr7:66656000-66660000	Weak transcription	Primary T helper cells fromperipheralblood	blood
38	chr7:66656000-66665000	Weak transcription	Primary T helper naive cells from peripheral blood	blood
39	chr7:66656000-66677000	Weak transcription	Pancreatic Islets	Pancreatic Islet
40	chr7:66656200-66660000	Weak transcription	HUES64 Cell Line	embryonic stem cell
41	chr7:66656400-66660200	Weak transcription	iPS-18 Cell Line	embryonic stem cell
42	chr7:66656400-66663200	Weak transcription	Fetal Thymus	thymus
43	chr7:66656400-66663600	Weak transcription	iPS-20b Cell Line	embryonic stem cell
44	chr7:66656400-66668800	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell
45	chr7:66656400-66672400	Weak transcription	Primary T helper memory cells from peripheral blood 2	blood
46	chr7:66656400-66676000	Weak transcription	Primary T killer naive cells fromperipheralblood	blood
47	chr7:66656600-66671800	Weak transcription	K562	blood
48	chr7:66656600-66675400	Weak transcription	Primary T helper 17 cells PMA-I stimulated	--
49	chr7:66657200-66660200	Weak transcription	Primary T cells fromperipheralblood	blood
50	chr7:66657200-66660200	Weak transcription	Primary Natural Killer cells fromperipheralblood	blood

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