Variant report

Variant	rs1027899
Chromosome Location	chr15:60615951-60615952
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 10 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:10)

rs_ID	r²[population]
rs11071517	0.86[AFR][1000 genomes];0.97[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs12901654	0.95[EUR][1000 genomes]
rs12903877	0.83[AFR][1000 genomes];0.91[AMR][1000 genomes];0.91[EUR][1000 genomes]
rs12903959	0.83[AFR][1000 genomes];0.86[AMR][1000 genomes];0.84[EUR][1000 genomes]
rs17191358	0.91[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs17270097	0.83[AFR][1000 genomes];0.97[AMR][1000 genomes];0.98[EUR][1000 genomes]
rs35013903	0.83[AFR][1000 genomes];0.97[AMR][1000 genomes];0.91[EUR][1000 genomes]
rs36160486	0.83[AFR][1000 genomes];0.91[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs67897916	0.86[AMR][1000 genomes];0.91[EUR][1000 genomes]
rs7169359	0.91[AMR][1000 genomes];0.87[EUR][1000 genomes]

No data

Chromatin state (count:8 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr15:60605000-60616000	Weak transcription	ES-I3 Cell Line	embryonic stem cell
2	chr15:60611600-60617400	Weak transcription	Aorta	Aorta
3	chr15:60615000-60616000	Weak transcription	HUES48 Cell Line	embryonic stem cell
4	chr15:60615000-60617000	Enhancers	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
5	chr15:60615600-60616200	Enhancers	Adipose Nuclei	Adipose
6	chr15:60615600-60618000	Enhancers	iPS-15b Cell Line	embryonic stem cell
7	chr15:60615800-60616000	Enhancers	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
8	chr15:60615800-60616000	Bivalent Enhancer	Foreskin Keratinocyte Primary Cells skin02	Skin

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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