Variant report

Variant	rs7169359
Chromosome Location	chr15:60633676-60633677
allele	A/C
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type
1	chr15:60630021..60635079-chr15:60635150..60637912,4	K562	blood:
2	chr15:60632289..60634096-chr15:60811401..60812974,2	MCF-7	breast:
3	chr15:60631638..60634015-chr15:60636412..60639111,3	K562	blood:

Variant related genes	Relation type
ENSG00000245534	Chromatin interaction

Extended variants
information (count: 10 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:10)

rs_ID	r²[population]
rs1027899	0.91[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs11071517	0.94[AMR][1000 genomes];0.84[EUR][1000 genomes]
rs12901654	0.85[EUR][1000 genomes]
rs12903877	1.00[AMR][1000 genomes];0.95[EUR][1000 genomes]
rs12903959	0.94[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs17191358	1.00[AMR][1000 genomes];0.95[EUR][1000 genomes]
rs17270097	0.94[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs35013903	0.94[AMR][1000 genomes];0.95[EUR][1000 genomes]
rs36160486	1.00[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs67897916	0.94[AMR][1000 genomes];0.95[EUR][1000 genomes]

No data

Chromatin state (count:50 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr15:60623200-60639400	Weak transcription	Fetal Heart	heart
2	chr15:60626400-60636200	Weak transcription	HSMM	muscle
3	chr15:60627200-60635400	Weak transcription	Breast Myoepithelial Primary Cells	Breast
4	chr15:60627800-60635600	Weak transcription	Fetal Stomach	stomach
5	chr15:60627800-60635800	Weak transcription	NHDF-Ad	bronchial
6	chr15:60627800-60637200	Weak transcription	Rectal Mucosa Donor 31	rectum
7	chr15:60628600-60635400	Weak transcription	Foreskin Melanocyte Primary Cells skin01	Skin
8	chr15:60628600-60637600	Weak transcription	Liver	Liver
9	chr15:60629400-60636400	Weak transcription	Fetal Muscle Trunk	muscle
10	chr15:60631000-60635400	Weak transcription	Pancreatic Islets	Pancreatic Islet
11	chr15:60631200-60637200	Weak transcription	Duodenum Mucosa	Duodenum
12	chr15:60631200-60637800	Weak transcription	Psoas Muscle	Psoas
13	chr15:60631200-60637800	Weak transcription	Rectal Smooth Muscle	rectum
14	chr15:60631400-60634800	Enhancers	H1 Derived Mesenchymal Stem Cells	ES cell derived
15	chr15:60631400-60637200	Weak transcription	Gastric	stomach
16	chr15:60631400-60637200	Weak transcription	Left Ventricle	heart
17	chr15:60632200-60637000	Weak transcription	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
18	chr15:60632200-60637200	Weak transcription	Skeletal Muscle Female	skeletal muscle
19	chr15:60632600-60634000	Enhancers	Foreskin Fibroblast Primary Cells skin01	Skin
20	chr15:60632800-60635800	Weak transcription	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
21	chr15:60632800-60636000	Weak transcription	HSMMtube	muscle
22	chr15:60632800-60638000	Weak transcription	NHEK	skin
23	chr15:60633000-60633800	Enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
24	chr15:60633000-60635800	Weak transcription	HUES6 Cell Line	embryonic stem cell
25	chr15:60633000-60635800	Weak transcription	Muscle Satellite Cultured Cells	--
26	chr15:60633000-60635800	Weak transcription	Fetal Muscle Leg	muscle
27	chr15:60633000-60638200	Weak transcription	ES-I3 Cell Line	embryonic stem cell
28	chr15:60633000-60638200	Weak transcription	HUES48 Cell Line	embryonic stem cell
29	chr15:60633000-60651400	Weak transcription	ES-WA7 Cell Line	embryonic stem cell
30	chr15:60633200-60635800	Weak transcription	H1 Cell Line	embryonic stem cell
31	chr15:60633200-60635800	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell
32	chr15:60633200-60636000	Weak transcription	IMR90 fetal lung fibroblasts Cell Line	lung
33	chr15:60633200-60636000	Weak transcription	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
34	chr15:60633200-60636000	Weak transcription	Foreskin Fibroblast Primary Cells skin02	Skin
35	chr15:60633200-60636200	Weak transcription	iPS-20b Cell Line	embryonic stem cell
36	chr15:60633200-60636400	Weak transcription	Placenta Amnion	Placenta Amnion
37	chr15:60633200-60637200	Weak transcription	Adipose Nuclei	Adipose
38	chr15:60633200-60637200	Weak transcription	Placenta	Placenta
39	chr15:60633200-60637800	Weak transcription	Skeletal Muscle Male	skeletal muscle
40	chr15:60633200-60639600	Weak transcription	iPS DF 6.9 Cell Line	embryonic stem cell
41	chr15:60633400-60636400	Weak transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
42	chr15:60633400-60636400	Weak transcription	NH-A	brain
43	chr15:60633400-60636600	Weak transcription	Fetal Intestine Large	intestine
44	chr15:60633400-60637200	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
45	chr15:60633400-60637400	Weak transcription	Foreskin Keratinocyte Primary Cells skin02	Skin
46	chr15:60633400-60638200	Weak transcription	Foreskin Keratinocyte Primary Cells skin03	Skin
47	chr15:60633400-60639600	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
48	chr15:60633400-60639600	Weak transcription	HepG2	liver
49	chr15:60633600-60634000	Weak transcription	iPS-15b Cell Line	embryonic stem cell
50	chr15:60633600-60634400	Weak transcription	A549	lung

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