Variant report

Variant	rs17191358
Chromosome Location	chr15:60632040-60632041
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr15:60630021..60635079-chr15:60635150..60637912,4	K562	blood:
2	chr15:60631638..60634015-chr15:60636412..60639111,3	K562	blood:

Extended variants
information (count: 10 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:10)

rs_ID	r²[population]
rs1027899	0.91[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs11071517	0.88[AFR][1000 genomes];0.94[AMR][1000 genomes];0.82[EUR][1000 genomes]
rs12901654	0.84[EUR][1000 genomes]
rs12903877	0.86[AFR][1000 genomes];1.00[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs12903959	0.86[AFR][1000 genomes];0.94[AMR][1000 genomes];0.86[EUR][1000 genomes]
rs17270097	0.86[AFR][1000 genomes];0.94[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs35013903	0.86[AFR][1000 genomes];0.94[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs36160486	0.86[AFR][1000 genomes];1.00[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs67897916	0.94[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs7169359	0.89[CEU][hapmap];1.00[AMR][1000 genomes];0.95[EUR][1000 genomes]

No data

Chromatin state (count:26 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr15:60623200-60639400	Weak transcription	Fetal Heart	heart
2	chr15:60626400-60636200	Weak transcription	HSMM	muscle
3	chr15:60627200-60635400	Weak transcription	Breast Myoepithelial Primary Cells	Breast
4	chr15:60627800-60635600	Weak transcription	Fetal Stomach	stomach
5	chr15:60627800-60635800	Weak transcription	NHDF-Ad	bronchial
6	chr15:60627800-60637200	Weak transcription	Rectal Mucosa Donor 31	rectum
7	chr15:60628600-60632600	Weak transcription	Foreskin Fibroblast Primary Cells skin01	Skin
8	chr15:60628600-60632800	Weak transcription	Foreskin Fibroblast Primary Cells skin02	Skin
9	chr15:60628600-60635400	Weak transcription	Foreskin Melanocyte Primary Cells skin01	Skin
10	chr15:60628600-60637600	Weak transcription	Liver	Liver
11	chr15:60629400-60636400	Weak transcription	Fetal Muscle Trunk	muscle
12	chr15:60630600-60632800	Enhancers	HepG2	liver
13	chr15:60631000-60633200	Enhancers	Skeletal Muscle Male	skeletal muscle
14	chr15:60631000-60635400	Weak transcription	Pancreatic Islets	Pancreatic Islet
15	chr15:60631200-60633000	Weak transcription	Foreskin Keratinocyte Primary Cells skin03	Skin
16	chr15:60631200-60637200	Weak transcription	Duodenum Mucosa	Duodenum
17	chr15:60631200-60637800	Weak transcription	Psoas Muscle	Psoas
18	chr15:60631200-60637800	Weak transcription	Rectal Smooth Muscle	rectum
19	chr15:60631400-60632200	Enhancers	Skeletal Muscle Female	skeletal muscle
20	chr15:60631400-60632400	Enhancers	Fetal Muscle Leg	muscle
21	chr15:60631400-60632800	Enhancers	HSMMtube	muscle
22	chr15:60631400-60634800	Enhancers	H1 Derived Mesenchymal Stem Cells	ES cell derived
23	chr15:60631400-60637200	Weak transcription	Gastric	stomach
24	chr15:60631400-60637200	Weak transcription	Left Ventricle	heart
25	chr15:60631800-60632200	Enhancers	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
26	chr15:60631800-60633600	Enhancers	A549	lung

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