Variant report

Variant	rs1031132
Chromosome Location	chr4:97108568-97108569
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 33 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:28)

rs_ID	r²[population]
rs11943079	1.00[CEU][hapmap]
rs11943536	0.83[AFR][1000 genomes];0.89[EUR][1000 genomes]
rs11943561	0.81[AFR][1000 genomes];0.90[EUR][1000 genomes]
rs11943616	0.91[EUR][1000 genomes]
rs13102143	0.82[AFR][1000 genomes];0.91[EUR][1000 genomes]
rs13127602	0.80[AFR][1000 genomes];0.87[EUR][1000 genomes]
rs1506302	0.80[AFR][1000 genomes];0.87[EUR][1000 genomes]
rs17025342	0.81[AFR][1000 genomes];0.88[EUR][1000 genomes]
rs17025392	0.80[AFR][1000 genomes];0.88[EUR][1000 genomes]
rs17025422	0.86[EUR][1000 genomes]
rs1911075	0.81[AFR][1000 genomes];0.88[EUR][1000 genomes]
rs2028711	0.80[AFR][1000 genomes];0.88[EUR][1000 genomes]
rs2120492	0.81[AFR][1000 genomes];0.89[EUR][1000 genomes]
rs2120493	0.83[AFR][1000 genomes];0.91[EUR][1000 genomes]
rs2865738	0.86[EUR][1000 genomes]
rs34167763	0.81[AFR][1000 genomes];0.88[EUR][1000 genomes]
rs34270338	0.96[AFR][1000 genomes];0.93[AMR][1000 genomes];0.97[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs34322283	0.80[EUR][1000 genomes]
rs35019362	0.82[AFR][1000 genomes];0.88[EUR][1000 genomes]
rs66790817	0.80[AFR][1000 genomes];0.88[EUR][1000 genomes]
rs67248356	0.81[AFR][1000 genomes];0.88[EUR][1000 genomes]
rs68169129	0.80[AFR][1000 genomes];0.88[EUR][1000 genomes]
rs71603290	0.81[AFR][1000 genomes];0.90[EUR][1000 genomes]
rs72684745	0.98[AFR][1000 genomes];0.89[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs7654559	0.86[EUR][1000 genomes]
rs7661756	0.98[AMR][1000 genomes];0.96[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7667610	0.80[AFR][1000 genomes];0.88[EUR][1000 genomes]
rs7667933	0.81[AFR][1000 genomes];0.86[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:5 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv830013	chr4:97033125-97204291	Enhancers Weak transcription Flanking Active TSS ZNF genes & repeats Active TSS Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	2 gene(s)	inside rSNPs	diseases
2	nsv1003868	chr4:97068155-97222544	Enhancers Active TSS ZNF genes & repeats Flanking Active TSS Weak transcription Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	2 gene(s)	inside rSNPs	diseases
3	nsv470057	chr4:97104880-97311657	Flanking Active TSS Enhancers Weak transcription Active TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	3 gene(s)	inside rSNPs	diseases
4	nsv461589	chr4:97104881-97311657	Enhancers Active TSS Flanking Active TSS Weak transcription ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	3 gene(s)	inside rSNPs	diseases
5	nsv594916	chr4:97104881-97311657	Active TSS Enhancers Flanking Active TSS Weak transcription ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	3 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr4:97105400-97109000	Enhancers	Dnd41	blood

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