Variant report

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr4:97090606..97093234-chr4:97096848..97099825,3	K562	blood:
2	chr4:97090980..97093234-chr4:97096848..97099424,2	K562	blood:

rSNPs within LD-proxies of this variant (count:27)

rs_ID	r²[population]
rs1031132	0.98[AMR][1000 genomes];0.96[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11943079	0.94[CEU][hapmap];1.00[CHD][hapmap];0.88[GIH][hapmap];1.00[JPT][hapmap];0.82[LWK][hapmap];1.00[MEX][hapmap];0.91[MKK][hapmap];0.94[TSI][hapmap]
rs11943536	0.88[EUR][1000 genomes]
rs11943561	0.89[EUR][1000 genomes]
rs11943616	0.90[EUR][1000 genomes]
rs13102143	0.90[EUR][1000 genomes]
rs13127602	0.87[EUR][1000 genomes]
rs1506302	0.86[EUR][1000 genomes]
rs17025342	0.87[EUR][1000 genomes]
rs17025392	0.87[EUR][1000 genomes]
rs17025422	0.85[EUR][1000 genomes]
rs1911075	0.87[EUR][1000 genomes]
rs2028711	0.87[EUR][1000 genomes]
rs2120492	0.87[EUR][1000 genomes]
rs2120493	0.90[EUR][1000 genomes]
rs2865738	0.85[EUR][1000 genomes]
rs34167763	0.87[EUR][1000 genomes]
rs34270338	0.91[AMR][1000 genomes];0.96[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs35019362	0.87[EUR][1000 genomes]
rs66790817	0.87[EUR][1000 genomes]
rs67248356	0.87[EUR][1000 genomes]
rs68169129	0.87[EUR][1000 genomes]
rs71603290	0.89[EUR][1000 genomes]
rs72684745	0.88[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs7654559	0.85[EUR][1000 genomes]
rs7667610	0.87[EUR][1000 genomes]
rs7667933	0.85[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv830013	chr4:97033125-97204291	Enhancers Weak transcription Flanking Active TSS ZNF genes & repeats Active TSS Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	2 gene(s)	inside rSNPs	diseases
2	nsv1003868	chr4:97068155-97222544	Enhancers Active TSS ZNF genes & repeats Flanking Active TSS Weak transcription Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	2 gene(s)	inside rSNPs	diseases

mRNA abundance (count:2)

SNP	Gene	Cis/trans	Tissue	Source
rs7661756	CHST6	trans	lymphoblastoid	seeQTL
rs7661756	ADH1A	cis	cerebellum	SCAN

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr4:97097000-97097600	Enhancers	Foreskin Keratinocyte Primary Cells skin03	Skin

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