Variant report
| Variant | rs72684745 |
|---|---|
| Chromosome Location | chr4:97091339-97091340 |
| allele | A/G |
| Outlinks | Ensembl UCSC |
- TF binding region (count:0)
- CpG islands (count:0)
- Chromatin interactive region (count:2)
- LncRNA region (count:0)
- Mature miRNA region (count: 0)
- miRNA target sites (count:0)
| No data |
| No data |
(count:2 , 50 per page) page:
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| No data |
| No data |
| No data |
| No data |
rSNPs within LD-proxies of this variant (count:26)
| rs_ID | r2[population] |
|---|---|
| rs1031132 | 0.98[AFR][1000 genomes];0.89[AMR][1000 genomes];0.93[EUR][1000 genomes] |
| rs11943536 | 0.81[AFR][1000 genomes];0.85[EUR][1000 genomes] |
| rs11943561 | 0.86[EUR][1000 genomes] |
| rs11943616 | 0.87[EUR][1000 genomes] |
| rs13102143 | 0.80[AFR][1000 genomes];0.87[EUR][1000 genomes] |
| rs13127602 | 0.84[EUR][1000 genomes] |
| rs1506302 | 0.83[EUR][1000 genomes] |
| rs17025342 | 0.84[EUR][1000 genomes] |
| rs17025392 | 0.84[EUR][1000 genomes] |
| rs17025422 | 0.82[EUR][1000 genomes] |
| rs1911075 | 0.84[EUR][1000 genomes] |
| rs2028711 | 0.84[EUR][1000 genomes] |
| rs2120492 | 0.84[EUR][1000 genomes] |
| rs2120493 | 0.81[AFR][1000 genomes];0.87[EUR][1000 genomes] |
| rs2865738 | 0.82[EUR][1000 genomes] |
| rs34167763 | 0.84[EUR][1000 genomes] |
| rs34270338 | 0.94[AFR][1000 genomes];0.83[AMR][1000 genomes];0.93[EUR][1000 genomes] |
| rs35019362 | 0.80[AFR][1000 genomes];0.84[EUR][1000 genomes] |
| rs66790817 | 0.84[EUR][1000 genomes] |
| rs67248356 | 0.84[EUR][1000 genomes] |
| rs68169129 | 0.84[EUR][1000 genomes] |
| rs71603290 | 0.86[EUR][1000 genomes] |
| rs7654559 | 0.82[EUR][1000 genomes] |
| rs7661756 | 0.88[AMR][1000 genomes];0.93[EUR][1000 genomes] |
| rs7667610 | 0.84[EUR][1000 genomes] |
| rs7667933 | 0.82[EUR][1000 genomes] |
Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page:
1
| No. | Variant name | Chromosome position | Chromatin state | Related regulatory elements | Target genes | Extended variants | Associated traits |
|---|---|---|---|---|---|---|---|
| 1 | nsv830013 | chr4:97033125-97204291 | Enhancers Weak transcription Flanking Active TSS ZNF genes & repeats Active TSS Genic enhancers | TF binding regionCpG islandChromatin interactive regionlncRNA | 2 gene(s) | inside rSNPs | diseases |
| 2 | nsv1003868 | chr4:97068155-97222544 | Enhancers Active TSS ZNF genes & repeats Flanking Active TSS Weak transcription Genic enhancers | TF binding regionCpG islandChromatin interactive regionlncRNA | 2 gene(s) | inside rSNPs | diseases |
| No data |
| No. | Chromosome Location | Chromatin state | Cell line | Tissue |
|---|---|---|---|---|
| 1 | chr4:97091200-97091400 | Active TSS | Placenta | Placenta |
