Variant report

Variant rs10408448
Chromosome Location chr19:55920148-55920149
allele G/T
Outlinks Ensembl   UCSC
Chromatin state (count:119 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr19:55918200-55920200 Active TSS Pancreatic Islets Pancreatic Islet
2 chr19:55918200-55920400 Active TSS hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
3 chr19:55918400-55920200 Active TSS iPS-18 Cell Line embryonic stem cell
4 chr19:55918400-55920200 Active TSS Liver Liver
5 chr19:55918400-55920400 Active TSS Brain Germinal Matrix brain
6 chr19:55918600-55920200 Active TSS Primary T regulatory cells fromperipheralblood blood
7 chr19:55919600-55920200 Enhancers H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
8 chr19:55919600-55920200 Flanking Active TSS Primary B cells from peripheral blood blood
9 chr19:55919600-55920200 Flanking Active TSS Primary T cells fromperipheralblood blood
10 chr19:55919600-55920200 Active TSS Foreskin Fibroblast Primary Cells skin02 Skin
11 chr19:55919600-55920200 Flanking Active TSS Placenta Placenta
12 chr19:55919600-55920200 Flanking Active TSS Skeletal Muscle Male skeletal muscle
13 chr19:55919600-55920200 Flanking Active TSS NHEK skin
14 chr19:55919600-55920600 ZNF genes & repeats Fetal Thymus thymus
15 chr19:55919800-55920200 Flanking Active TSS H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
16 chr19:55919800-55920200 Flanking Active TSS H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
17 chr19:55919800-55920200 Flanking Active TSS H9 Derived Neuron Cultured Cells ES cell derived
18 chr19:55919800-55920200 Flanking Active TSS HUES48 Cell Line embryonic stem cell
19 chr19:55919800-55920200 Flanking Active TSS HUES6 Cell Line embryonic stem cell
20 chr19:55919800-55920200 Flanking Active TSS IMR90 fetal lung fibroblasts Cell Line lung
21 chr19:55919800-55920200 Flanking Active TSS iPS-15b Cell Line embryonic stem cell
22 chr19:55919800-55920200 Flanking Active TSS iPS-20b Cell Line embryonic stem cell
23 chr19:55919800-55920200 Flanking Active TSS Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
24 chr19:55919800-55920200 Flanking Active TSS Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
25 chr19:55919800-55920200 Flanking Active TSS Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
26 chr19:55919800-55920200 Flanking Active TSS Breast Myoepithelial Primary Cells Breast
27 chr19:55919800-55920200 Flanking Active TSS Primary monocytes fromperipheralblood blood
28 chr19:55919800-55920200 Flanking Active TSS Primary neutrophils fromperipheralblood blood
29 chr19:55919800-55920200 Flanking Active TSS Primary B cells from cord blood blood
30 chr19:55919800-55920200 Flanking Active TSS Primary T cells from cord blood blood
31 chr19:55919800-55920200 Flanking Active TSS Primary T helper memory cells from peripheral blood 2 blood
32 chr19:55919800-55920200 Flanking Active TSS Primary T helper naive cells fromperipheralblood blood
33 chr19:55919800-55920200 Flanking Active TSS Primary T helper memory cells from peripheral blood 1 blood
34 chr19:55919800-55920200 Flanking Active TSS Primary T helper cells PMA-I stimulated --
35 chr19:55919800-55920200 Flanking Active TSS Primary T helper 17 cells PMA-I stimulated --
36 chr19:55919800-55920200 Flanking Active TSS Primary Natural Killer cells fromperipheralblood blood
37 chr19:55919800-55920200 Flanking Active TSS Primary T killer naive cells fromperipheralblood blood
38 chr19:55919800-55920200 Flanking Active TSS Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
39 chr19:55919800-55920200 Flanking Active TSS Primary hematopoietic stem cells G-CSF-mobilized Female --
40 chr19:55919800-55920200 Flanking Active TSS Primary hematopoietic stem cells G-CSF-mobilized Male --
41 chr19:55919800-55920200 Flanking Active TSS Muscle Satellite Cultured Cells --
42 chr19:55919800-55920200 Flanking Active TSS Cortex derived primary cultured neurospheres brain
43 chr19:55919800-55920200 Flanking Active TSS Ganglion Eminence derived primary cultured neurospheres brain
44 chr19:55919800-55920200 Flanking Active TSS Foreskin Fibroblast Primary Cells skin01 Skin
45 chr19:55919800-55920200 Flanking Active TSS Adipose Nuclei Adipose
46 chr19:55919800-55920200 Flanking Active TSS Brain Cingulate Gyrus brain
47 chr19:55919800-55920200 Flanking Active TSS Brain Hippocampus Middle brain
48 chr19:55919800-55920200 Flanking Active TSS Brain Dorsolateral Prefrontal Cortex brain
49 chr19:55919800-55920200 Flanking Active TSS Brain Substantia Nigra brain
50 chr19:55919800-55920200 Flanking Active TSS Colonic Mucosa Colon

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