Variant report

Variant rs61468173
Chromosome Location chr19:55898455-55898456
allele A/C
Outlinks Ensembl   UCSC
Chromatin state (count:127 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr19:55894600-55898600 Active TSS iPS DF 6.9 Cell Line embryonic stem cell
2 chr19:55894800-55899000 Active TSS Small Intestine intestine
3 chr19:55894800-55899200 Active TSS Pancreatic Islets Pancreatic Islet
4 chr19:55894800-55899600 Active TSS H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
5 chr19:55896800-55899000 Active TSS HSMMtube muscle
6 chr19:55897400-55898600 Flanking Active TSS Primary B cells from cord blood blood
7 chr19:55897400-55899400 Flanking Active TSS Primary hematopoietic stem cells blood
8 chr19:55897400-55899800 Transcr. at gene 5' and 3' Primary T helper naive cells fromperipheralblood blood
9 chr19:55897400-55900200 Transcr. at gene 5' and 3' HUES6 Cell Line embryonic stem cell
10 chr19:55897400-55900200 Transcr. at gene 5' and 3' Primary T helper 17 cells PMA-I stimulated --
11 chr19:55897400-55900400 Transcr. at gene 5' and 3' Dnd41 blood
12 chr19:55897600-55899800 Transcr. at gene 5' and 3' Primary T regulatory cells fromperipheralblood blood
13 chr19:55897600-55900200 Transcr. at gene 5' and 3' Muscle Satellite Cultured Cells --
14 chr19:55897600-55900400 Transcr. at gene 5' and 3' NHEK skin
15 chr19:55897600-55901000 Transcr. at gene 5' and 3' A549 lung
16 chr19:55897600-55903000 Transcr. at gene 5' and 3' Foreskin Fibroblast Primary Cells skin02 Skin
17 chr19:55897800-55898600 Flanking Active TSS Primary neutrophils fromperipheralblood blood
18 chr19:55897800-55898600 Flanking Active TSS Liver Liver
19 chr19:55897800-55899200 Transcr. at gene 5' and 3' HUES64 Cell Line embryonic stem cell
20 chr19:55897800-55899400 Transcr. at gene 5' and 3' Fetal Intestine Small intestine
21 chr19:55897800-55899600 Transcr. at gene 5' and 3' H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
22 chr19:55897800-55899600 Transcr. at gene 5' and 3' hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
23 chr19:55897800-55899600 Transcr. at gene 5' and 3' IMR90 fetal lung fibroblasts Cell Line lung
24 chr19:55897800-55899800 Transcr. at gene 5' and 3' HMEC breast
25 chr19:55897800-55900200 Transcr. at gene 5' and 3' Primary hematopoietic stem cells short term culture blood
26 chr19:55897800-55900600 Transcr. at gene 5' and 3' iPS-20b Cell Line embryonic stem cell
27 chr19:55897800-55900800 Transcr. at gene 5' and 3' Foreskin Keratinocyte Primary Cells skin02 Skin
28 chr19:55897800-55901400 Transcr. at gene 5' and 3' Hela-S3 cervix
29 chr19:55897800-55902200 Transcr. at gene 5' and 3' Foreskin Melanocyte Primary Cells skin01 Skin
30 chr19:55897800-55903000 Transcr. at gene 5' and 3' Foreskin Fibroblast Primary Cells skin01 Skin
31 chr19:55898000-55898600 Flanking Active TSS Monocytes-CD14+_RO01746 blood
32 chr19:55898000-55898800 Flanking Active TSS Primary T helper memory cells from peripheral blood 2 blood
33 chr19:55898000-55898800 Flanking Active TSS Fetal Heart heart
34 chr19:55898000-55899000 Flanking Active TSS Primary T killer naive cells fromperipheralblood blood
35 chr19:55898000-55899000 Transcr. at gene 5' and 3' Cortex derived primary cultured neurospheres brain
36 chr19:55898000-55899000 Transcr. at gene 5' and 3' Fetal Muscle Leg muscle
37 chr19:55898000-55899000 Transcr. at gene 5' and 3' Fetal Stomach stomach
38 chr19:55898000-55899200 Flanking Active TSS Psoas Muscle Psoas
39 chr19:55898000-55899200 Transcr. at gene 5' and 3' Skeletal Muscle Female skeletal muscle
40 chr19:55898000-55899400 Transcr. at gene 5' and 3' Fetal Muscle Trunk muscle
41 chr19:55898000-55899400 Transcr. at gene 5' and 3' Thymus Thymus
42 chr19:55898000-55899600 Transcr. at gene 5' and 3' Lung lung
43 chr19:55898000-55900000 Transcr. at gene 5' and 3' hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
44 chr19:55898000-55900000 Transcr. at gene 5' and 3' Brain Hippocampus Middle brain
45 chr19:55898000-55900000 Transcr. at gene 5' and 3' Esophagus oesophagus
46 chr19:55898000-55900200 Transcr. at gene 5' and 3' H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
47 chr19:55898000-55900200 Transcr. at gene 5' and 3' Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
48 chr19:55898000-55900200 Transcr. at gene 5' and 3' Brain Cingulate Gyrus brain
49 chr19:55898000-55900400 Transcr. at gene 5' and 3' iPS-15b Cell Line embryonic stem cell
50 chr19:55898000-55900400 Transcr. at gene 5' and 3' Primary T helper cells PMA-I stimulated --

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