The 2.0 version of rSNPBase

Variant report

Variant rs1041605
Chromosome Location chr1:56920573-56920574
allele G/T
Outlinks Ensembl   UCSC
Chromatin state (count:38 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:56905400-56942600 Weak transcription Gastric stomach
2 chr1:56912800-56922400 Weak transcription Placenta Amnion Placenta Amnion
3 chr1:56912800-56923400 Weak transcription Spleen Spleen
4 chr1:56913800-56943200 Weak transcription Aorta Aorta
5 chr1:56915000-56922400 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
6 chr1:56915200-56922400 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
7 chr1:56915200-56935800 Weak transcription NHLF lung
8 chr1:56916200-56922200 Weak transcription Lung lung
9 chr1:56916400-56921200 Weak transcription Hela-S3 cervix
10 chr1:56916800-56920600 Enhancers H9 Cell Line embryonic stem cell
11 chr1:56917600-56921400 Weak transcription Skeletal Muscle Male skeletal muscle
12 chr1:56918000-56922200 Weak transcription Small Intestine intestine
13 chr1:56918000-56922600 Weak transcription Breast Myoepithelial Primary Cells Breast
14 chr1:56918200-56922000 Weak transcription A549 lung
15 chr1:56918600-56926600 Weak transcription Fetal Thymus thymus
16 chr1:56919000-56923200 Weak transcription Fetal Adrenal Gland Adrenal Gland
17 chr1:56919200-56927200 Weak transcription ES-WA7 Cell Line embryonic stem cell
18 chr1:56919200-56930000 Weak transcription NHDF-Ad bronchial
19 chr1:56919600-56921400 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
20 chr1:56919600-56922000 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
21 chr1:56919600-56922000 Weak transcription HepG2 liver
22 chr1:56919600-56922200 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
23 chr1:56919600-56922200 Weak transcription Fetal Muscle Leg muscle
24 chr1:56919600-56922200 Weak transcription Right Atrium heart
25 chr1:56919600-56922200 Weak transcription Right Ventricle heart
26 chr1:56919600-56922400 Weak transcription HUES64 Cell Line embryonic stem cell
27 chr1:56919600-56922600 Weak transcription Fetal Heart heart
28 chr1:56919600-56922800 Weak transcription iPS-20b Cell Line embryonic stem cell
29 chr1:56919600-56923400 Weak transcription Left Ventricle heart
30 chr1:56919600-56923600 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
31 chr1:56919800-56922400 Weak transcription HUES48 Cell Line embryonic stem cell
32 chr1:56919800-56922400 Weak transcription iPS-15b Cell Line embryonic stem cell
33 chr1:56919800-56922600 Weak transcription ES-I3 Cell Line embryonic stem cell
34 chr1:56919800-56923200 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
35 chr1:56919800-56926600 Weak transcription Liver Liver
36 chr1:56919800-56927000 Weak transcription HUES6 Cell Line embryonic stem cell
37 chr1:56919800-56934200 Weak transcription Fetal Stomach stomach
38 chr1:56920200-56922200 Weak transcription ES-UCSF4 Cell Line embryonic stem cell

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Last update: Aug 31, 2015